Strigops habroptila (Kakapo): 115600605
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Entry
115600605 CDS
T08851
Symbol
CYLD
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04217
Necroptosis
shab04622
RIG-I-like receptor signaling pathway
shab04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115600605 (CYLD)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
115600605 (CYLD)
04625 C-type lectin receptor signaling pathway
115600605 (CYLD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shab01002
]
115600605 (CYLD)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115600605 (CYLD)
Enzymes [BR:
shab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115600605 (CYLD)
Peptidases and inhibitors [BR:
shab01002
]
Cysteine peptidases
Family C67
115600605 (CYLD)
Ubiquitin system [BR:
shab04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115600605 (CYLD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
COX_ARM
Motif
Other DBs
NCBI-GeneID:
115600605
NCBI-ProteinID:
XP_030325620
LinkDB
All DBs
Position
Z:15872139..15900591
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AA seq
957 aa
AA seq
DB search
MNSGLWSQEKGSSSYWEERIFYLLLQECSVLDKQTQKLLKVPKGSIGQFFQDRSSVGHSR
NIPCKGKKLQIGLKILEQPHAILFVDEKDVIEINEKLAELLLAITNCEERYSLFKSKSRL
TKGIQIDIGSPVRVQLRSGDEKFPGVVRFRGPLMQERSLTGIYFGVELLEEGRGQGFTDG
QYQGKQLFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVDAMQVELPPLEINSRVSLK
IGESIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHI
NDVIPETVSQDRRPPKLAYTSRGGGDKSLFNHSKPKSTGSTSETGNRNRSEVFYTLNGSS
VDSQPQTKAKPPWYIDEAAEDPAKSLSDSSPGFGHSSPPLQPPLTNSMSTENRFHSLPFS
LTKTSNTNGTGTAIGHSPLSLSVQSVIGDVNTTASQESPSSAGPVGNSHGLEAGSLAEVK
ENPPFYGVIRWIGQPPGVNEVLAGLELEDECAGCTDGTFKGTRYFTCAPKKALFVKLKSC
RPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLETMIGKKKGIQGHYN
SCYLDSTLFCLFSFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKI
MKLRKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFM
DKNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITD
LLEDTPRQCRICGGLAMYECRECYEDTDISAGKIKQFCKTCNTQVHLHPKRQSHKFNPLS
LPKDLPDWDWRHGCIPYQKMELFAVLCIETSHYVAFVKYGRDDSAWLFFDSMADRDGGQN
GFNIPQVTPCPEVGEYLKMSLEELHSLDSRKIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgggcttatggagtcaagagaaaggaagttcatcttattgggaagagcggatc
ttttacttgcttctccaggaatgcagtgtcttagacaagcagactcaaaagctcttaaaa
gtgcccaaaggtagcattgggcagttttttcaagaccgttcttctgtgggacactccaga
aatattccttgtaaaggcaagaaactgcaaattggattaaagattctggaacaacctcat
gcaatcctgtttgtggacgagaaagatgttatagaaataaatgaaaagctagctgagttg
cttttggctattactaactgtgaggaaaggtacagtctgtttaaaagcaaaagcaggtta
actaaaggcatccaaatagatattgggtcacctgttagagtacagctgagatcaggagat
gaaaaatttcctggagttgttcgtttcagaggacctttgatgcaagaaaggtccctaaca
gggatctactttggagtagagttactggaagaaggtcgtggtcagggctttactgatgga
cagtaccaaggcaagcagcttttcagatgcgatgaggattgtggggtttttgttgctttg
gacaaactggagctggtggaagatgacgacaatgaactggaaagtgactatgcagctcct
gttgacgcaatgcaggtagaacttcctcctctggagatcaactccagggtttctctgaag
ataggagagagtatagagtatgggacagttatattctgtgatgtcttaccaggaaacgaa
agtttaggatacgttgttggagtggacatggataatcctattggaaactgggatggaaga
tataatggaatacagctgtgcagttttgcaagtgttgaaagtacacttcttttgcatatc
aatgatgttattccagagactgtgtcacaggacaggagacctcccaagcttgcttatacc
tcaagaggtggtggtgacaaaagcttgttcaatcatagtaagccaaagtctactggatct
acctctgaaactggaaatagaaacagatctgaagtcttctacacattaaatggctcatcg
gttgactctcagcctcaaacaaaagcaaaacccccatggtatattgatgaagctgccgaa
gacccagcaaaatcacttagtgattcatctcctggatttggacattcttcaccaccactg
cagccacctttaacgaactctatgtctacagaaaacagatttcactccctccctttcagc
ttgacaaaaacgtcaaacactaacggtactggtactgctattggacacagccctctctct
ttatctgttcagtctgtcattggtgatgtaaatactacagcaagccaggagagtccatca
tcagcaggcccagttgggaactcgcatggtcttgaagcaggttccttggctgaagttaaa
gaaaatcctcctttctatggagtaatccgctggattggacagccccctggagtaaatgaa
gtattagctggactggaactggaagatgaatgtgcaggttgtacggatggcacatttaaa
ggaactcgatacttcacttgtgctccgaagaaagctctttttgttaaactcaaaagctgc
aggccagattccaggtttgcctcactacagcctgtttccaaccagattgaacgctgcaac
tctttagcctttggaggttacttaagtgaagttgtagaagaaaacactcctccaaaaatg
gaaaaagaaggtttagagacaatgattggaaagaagaaaggtatccagggtcattacaac
tcctgttacttagactccaccttattctgcctgttttcttttagctctgttttggacact
gtgttactcagacctaaagaaaagaatgacgtagagtattatagtgagacccaagagctg
ttgaggacagagattgtgaatcctctgagaatatatggatatgtatgtgctacaaaaata
atgaaactgaggaaaatacttgaaaaagttgaggctgcatcaggattcacttcagaggaa
aaagatccagaagaatttttgaatattttatttcaccatattttaagagttgagccactg
ttgaaaataagatcagcaggtcagaaagtacaagactgttacttctatcaaatttttatg
gacaaaaatgagaaagttggagtcccgacaattcagcagttactagagtggtcattcatc
aacagcaacttgaagtttgcagaggcaccctcttgcctgatcatccagatgcctcggttt
ggaaaagacttcaaaatgttcaacaaaatttttccatccttggaattaaatataacagac
ttacttgaagacactcccaggcagtgccgcatttgcggagggctcgctatgtatgagtgc
agagaatgttacgaagatactgatatttctgctgggaaaatcaaacagttctgcaaaacg
tgcaatacccaagttcatcttcatcccaagagacagagtcataaattcaatccattgtca
ctacctaaagacctgccagactgggactggcgacatggctgcataccgtaccagaagatg
gagttgtttgctgttctctgcatagaaacaagccactatgtagcttttgttaaatatggg
agggatgactccgcctggctcttctttgacagcatggcagatcgggatggaggtcagaat
ggctttaacattccacaagttaccccatgtccagaggttggtgaatatctgaagatgtct
ttagaagaattacactcgttggattccagaaaaattcaaggttgtgcacgaagactactt
tgtgatgcgtatatgtgcatgtatcaaagtccaacgatgagtttatacaaatga
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