Strigops habroptila (Kakapo): 115600701
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Entry
115600701 CDS
T08851
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03022
Basal transcription factors
shab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115600701
09124 Replication and repair
03420 Nucleotide excision repair
115600701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115600701
03400 DNA repair and recombination proteins [BR:
shab03400
]
115600701
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115600701
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115600701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Matrix
VWA_3
Motif
Other DBs
NCBI-GeneID:
115600701
NCBI-ProteinID:
XP_030325825
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All DBs
Position
Z:41681649..41694269
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AA seq
395 aa
AA seq
DB search
MEEEPERTKRWEGGYERTWEILKEDESGSLKPTIESILFKAKRKRLYEHHGQVRLGMMRH
LYMVIDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQLGLIVTKSKRAEKMTEL
SGNTKKHLTALKKAVDMNCSGEPSLYNSLNLAMQTLKHMPAHTSREVLVVFSSLTTCDPA
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLMHHVSPPP
ASSSSECSLIRMGFPQHAIASLSDQDAKPSFSMVQLENNSEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYQGERCCQGCQGEMKDQNVYVC
KVCQNVFCVDCDLFIHDCLHCCPGCVHGHSAPMSA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaacctgaacggacaaagcgctgggaaggaggctacgagagaacttgggaa
attcttaaagaagatgaatccgggtcgctgaaaccgaccatcgagagtatcctcttcaag
gcaaagaggaagagactctatgaacaccatggacaagttcgacttggaatgatgcgtcac
ctttacatggttattgatggatcaagaactatggaagaccaagatttaaaaccgaacagg
cttacttgcactttgaagctattggagtattttgttgaagagtactttgaccaaaatcct
attagtcagcttggcttaattgtaaccaagagtaaaagagctgaaaaaatgacagaactt
tcaggtaacacaaaaaagcacttaactgctctgaagaaagcagtggatatgaactgcagt
ggagagccgtctctgtataattccctaaatttggctatgcagactttaaagcacatgcca
gcacatacaagcagagaggttttggtagtcttcagcagcctgacgacatgtgatccagcc
aacatctatgatctgattaagtgtttaaaagcagttaagatcagagtgtctgtcatcggc
ctaagtgctgaggttcgagtttgtacagtacttgcccgagaaactggtggaacataccac
gttattttagatgaaagtcattataaggaactgctgatgcatcatgttagtcctccacct
gccagttcaagttctgagtgctcccttattcgaatgggttttcctcagcatgctattgct
tctctatctgatcaagatgcaaagccatcctttagcatggtgcaattggaaaacaacagt
gagccaggtcttactctgggtggatatttctgtccccagtgcagagccaaatactgtgaa
cttcctgtggaatgcaaaatctgtggtctcacattagtttctgcacctcatctggctcgg
tcttaccatcatttgtttcctttggatgcctttcaggaagttcccttggaagagtatcag
ggggaacggtgttgtcaaggctgccagggagaaatgaaagatcaaaatgtttacgtatgt
aaagtgtgtcagaatgtattttgcgtggattgcgatctgtttattcatgattgtctgcac
tgctgtcctggctgtgttcatgggcactctgctcccatgtctgcatga
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