Strigops habroptila (Kakapo): 115602606
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Entry
115602606 CDS
T08851
Symbol
MEF2D
Name
(RefSeq) myocyte-specific enhancer factor 2D isoform X1
KO
K09262
MADS-box transcription enhancer factor 2D
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
115602606 (MEF2D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115602606 (MEF2D)
04131 Membrane trafficking [BR:
shab04131
]
115602606 (MEF2D)
Transcription factors [BR:
shab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
115602606 (MEF2D)
Membrane trafficking [BR:
shab04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
115602606 (MEF2D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
TFIIA
FAM101
MDM10
CPSF100_C
EOS1
Connexin
Presenilin
Suf
Dala_Dala_lig_N
PAT1
TMEM51
SpoIIP
eIF-3_zeta
FHIPEP
Tim54
SLC52_ribofla_tr
Gti1_Pac2
Motif
Other DBs
NCBI-GeneID:
115602606
NCBI-ProteinID:
XP_030329721
LinkDB
All DBs
Position
22:207219..297162
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AA seq
526 aa
AA seq
DB search
MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKG
SEDLDILFKRYGSAVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLS
PQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNG
SSLGKIIPAKSPPPPSHSTQLATNSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGV
SQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLPSAELSSLPAFSSPSGLSLGN
ISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQHLVPVSLGNLIQGS
HLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTS
SYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaaaaagatccagatccagcggatcacggacgagcgcaatcggcaggtgacc
ttcaccaagcgcaagttcggtttgatgaagaaagcctatgagctgagcgtcctgtgcgac
tgcgagatcgccctcatcatcttcaaccactccaacaagctgttccagtatgccagcacc
gacatggacaaggtgctgctcaagtacaccgagtacaacgagccccacgagagccggacc
aacgcggacatcatcgagacgttaagaaagaaaggttttaacggctgtgacagcccggag
cccgacggcgatgactcgatagaccagagccccttgatggaggataaataccgtaaaggc
agcgaggatctggatatcctcttcaagcgctatggttctgcagtgccagctcccaacttc
gccatgcccgtgacggtgccggtgaccaaccagaacacgctgcagttcagcaaccctggc
agctcgctggtgacacagtccctggtgacatcctcactgacagacccgcggctcctctcg
ccacagcagccagcgctgcagaggaacaccgtgtccccggggctgccacagaggccggcc
agtgcaggggcgatgcttgggggagacctgaacaacacgaacggagcctgcccgagccct
gtgggaaacggctacgtgagtgccagagcctctccgggtctccttcccgtgtccaacggc
agcagcttgggcaagatcatcccggccaagtccccgccgccgccgtcgcacagcacccag
ctcgccaccaacagccgcaagccggatttacgcgtgatcacctcacagagcggcaagggc
ttgatgcaccatttgaccgaggaccacttggctctgcagaacacgcagcggttgggtgtc
tcccaagcaactcactctttaaccacaccggttgtttctgtggctactccgagtttgctg
acgcaggggctgcctttctctgccatgcccacagcctacaacacagattatcagctgccg
agtgctgagttgtcttcgctgccagcattcagctcacccagtgggctgtcccttggcaac
atctctgcctggcagcagcagcagcagcagcaacaacagcaacaacagcagcaacagcag
caacagcagcagcagcagcaacaacagcagcaacaacagcagcagcagcagcaacagcca
cagcagcagccacagcagcatctggttcctgtatcactaggaaatttaatacaagggagt
cacttatcccacaccaccactttgactgtcaacaccaaccccaacatcagcatcaagtcg
gagcccgtctcacccaaccgggaaaggaacactgccaccccgctcagcaccttcccccac
cagccccggcacgagcccaccggccgctcgcccgtcgacagcctcagcagcaacaccagc
tcctacgaaggcagcagcgagcgggatgatcccgcccgccctgatttcggctcatccctg
ggcctcctgcgacccaccagcgagcccgagggcgagagcccctccgtaaagcgcatgcgg
ttggatacctgggtcacataa
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