Strigops habroptila (Kakapo): 115605051
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Entry
115605051 CDS
T08851
Symbol
TRAPPC8
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115605051 (TRAPPC8)
Membrane trafficking [BR:
shab04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
115605051 (TRAPPC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
SNAP
Motif
Other DBs
NCBI-GeneID:
115605051
NCBI-ProteinID:
XP_030334711
LinkDB
All DBs
Position
1:44494799..44547514
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AA seq
1473 aa
AA seq
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MAQCVQSVQEFIQDSFVPLVAALCSEEAERLTRKNSLSFAELVKPFCRLTSEVHMRDPNN
QLHIIKNLKIAVNNIITHPPQPGAIRKLLNDVVSVSQPAEGLVANVITAGDYDLNISDRS
VKASVPWYNNWKETLMELNTSTFYSATTXWFENYRECFLQSMPASDHEFLTTMLQCMLVV
SSSEPEPVEQFLKLSQEQHRIQHSSEYLYPKWFIPNTLKYYVLLHDVSTGEEQRADSIYE
EMKQRYGTQGCYLLKINSRVSNRGTDEQIPDPWSQYLQKNTIQNQDCYEDCPYTVISNKS
SDHLISDGLDSEIKDGLPNNFKTHPLQLDHPSGSLDSTDYTKATTSLQDSKKSNSGTPHG
ACLTLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLISRKGLSRSLFSATKKWFSGSK
VPEKSINELKNTSGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYHTAKKDFLNDQAML
YAAGALEMAAVSAFLQPGAPRPYPAHYMETAIQTYRDICKNMVLAERCVLLSAEILKSQS
KYSEAAALLIRLTSEDSDLRSALLLEQAAHCFINMKSPMVRKFAFHMILAGHRFSKAGQK
KHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQLDNAVSAFRHILINDSKQPPA
QQGAFLREYLYVYKNVTQLSPDGPLPQLPLPYINSSATRVFFGHDRRPAEGEKQAATHVS
LDQEYDSESSQQWKELEEQVVSVVNKGTIPSNFQPTQFCLNRYSDNSKFPLAVIEEPITV
EVSFRNPLKVPLLLTDLSLLWKFQPKDFNRKHEGETKELGTCDGAMIGTEAIAEFLINSE
ETKVARLKLFPHQTGELHILGVVYDLGTVQGAVTLDGIDPSVGLQTGKFVSNGLSVRGRQ
DLEIQGPRLNNTKEEKTSIKYGPDRRLDPIITEEMPLLEVFFINFPTGLLCGEIRKAYVE
FVNVSKCPLTALKVVSKHPEFFTFGGNTAVLTPLSPSASENCSAYKTVVTDPTSVRTALL
SSASSVDFGVGPGGQPEVINVPLPDAVLLPGASVQLPMWLRGPDEEGVHEINFLFYYESI
KRHSKMCHRVLRHTAVICTSRSLHIRATVCRSNALEDEEGRGGNMLVFVDVENINTSETG
VKEFHIVQVSSNSKHWKLQKSVNISEDKDTKLASRERAKLCFKAVRCKNSEENYTFADIV
FGNEQIISSASPCADFFFQSLSTEFKRTHVQSHTHASQRAAKQSFDETVRLIQRCSEVDL
NIVVLWKAYVVEDNKQLILEGQHHVALNTVGKEAFSFPQKQGFKKILGNSDWEDLEQELP
EMVLLKFFRPENTPVPARPTPEQLSNLIKTSLHYPESFNHSFHQKSLCLVPVTLLLSNCS
QAVVDVMIDLRHKTTSPEALEIHGSFTWLGQTQYKLQLKSQEVYSLQLKACFVHTGVYNL
GTPRVFAKLVDQVTLFETSQQNSMPALIIINNI
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtgcagtcggtgcaggagttcatccaggactcgttcgtgcccttggtg
gccgcgctgtgcagcgaggaggcggagaggctcactcgcaagaacagcctgagcttcgcc
gagctggtgaagcccttctgccgcctcacctcggaagttcacatgagagatcctaataat
cagcttcacataattaaaaatttgaaaattgctgtcaacaacattattactcacccacct
cagcctggtgccattcggaagcttttgaatgatgtcgtgtctgtcagtcagcctgctgaa
ggactggtagctaatgtgatcacagctggagattatgatctcaacattagtgatcgctca
gttaaagctagtgttccttggtacaataattggaaagagacactgatggaactgaacaca
tccacgttttattcagctactactncttggtttgagaattacagagagtgttttcttcag
tccatgcctgcatcagatcatgaattcttaaccactatgttgcaatgtatgcttgtagtt
tcttctagtgaaccagagccagtggagcaatttctgaagctgtctcaagaacaacatcga
attcaacatagtagtgaatacttatatcccaagtggtttataccaaacacgctcaaatac
tatgtgttattgcatgatgtaagcacaggagaagagcaaagggctgattccatttatgaa
gaaatgaagcagaggtatggaactcagggttgctatttgctgaaaataaattctcgggtg
tctaatagaggaacagatgaacagataccagatccttggagtcagtaccttcagaaaaac
actatccagaaccaggattgctatgaagactgtccttatactgtcatttcaaacaagagt
agtgatcacttgatatcagatggcttagacagtgaaattaaagatggcctgccaaataac
tttaagactcacccgcttcaactggatcatcccagtggcagtttggatagcactgattac
acaaaggctaccacatcattgcaagactcaaagaaatcaaattctggaacgccgcatggt
gcttgtttaacactcacagatcacgatcgaattaggcaattcatacaggaattcacattt
aggggacttttgccacatatagagaagacaattcggcaacttaatgatcagttaatatcc
aggaaaggcttgagtcgatcactgttttctgctactaaaaaatggtttagcggcagcaag
gttccagagaaaagtataaatgaactgaagaatacttctggtttgctgtatccacctgaa
gcaccagagcttcaaatccggaaaatggcagacttgtgctttttggtgcaacactatgaa
cttgcatatagctgttaccatacagcaaagaaagacttcttaaatgatcaggcaatgctt
tatgcagctggagcactggaaatggcagcagtatcagcttttcttcagcctggagctcct
agaccatatcctgctcattatatggaaacagcaattcagacctatcgagatatctgcaag
aacatggttctggctgagcgctgtgtgctgcttagtgccgaaatcttaaaaagtcaaagc
aaatattcggaggcagctgctcttctgattcgtttaaccagtgaggattcagatcttcgc
agtgcactcctgttggagcaggcagcccattgttttataaacatgaaaagtcccatggtt
agaaagtttgcgtttcatatgatattggctggccataggtttagtaaagcaggccagaaa
aaacatgccttacgttgctactgtcaagccatgcaggtttacaaagggaaaggctggtct
cttgcagaagaccatattaacttcactattggtcgccagtcctttacgcttcgtcagctt
gacaatgctgtgtctgccttcaggcatattttgatcaacgatagtaaacaacctccagct
cagcaaggagcttttttaagagaatatctttatgtatataagaacgtaacccagctgtca
cctgatggtcccttaccacagcttcctttaccgtatattaacagctcagcaacccgtgtt
ttctttgggcatgatcgaagaccagcagaaggtgaaaagcaggcagctacgcacgtaagt
ctggatcaggagtatgactcagaatcatcacaacagtggaaggaacttgaggagcaagtt
gtttctgtggtaaataaaggaacgataccttcaaactttcaaccaacgcagttctgttta
aatcgctactcggataactccaaatttccacttgctgtgatagaagaaccaataactgta
gaagtgtccttccgaaaccctctgaaagttccacttcttttgactgacctttcattgctg
tggaagtttcaacctaaagacttcaatagaaagcatgaaggagaaacaaaagagctggga
acatgtgatggtgccatgataggaactgaagcaatagcagaatttttaattaatagtgag
gagacaaaagtggcaagactaaagctctttccccatcaaacaggggagctacatattctg
ggagtcgtttatgatcttggcactgttcagggtgctgtgacattagatgggatagatcct
tctgttggattacagacaggaaagtttgtctccaatgggttatctgtacgaggacgacaa
gatttagaaatccaagggcctcgacttaataacacaaaagaggagaaaacatctattaaa
tatggacctgatcgacgtttagatcccattattacagaagaaatgcctttgctggaggtg
ttctttataaattttcctacagggcttctctgtggagaaatcagaaaagcatatgtagaa
tttgtgaatgtaagcaagtgtcctcttacagcactgaaggttgtgtccaagcatccagaa
ttttttacttttggtggaaatactgctgttctaacgccactaagtccttcagcttctgaa
aactgtagtgcttacaagactgttgtgacagatcctacctctgtgcgtacagcactgcta
tcttcagcttcttctgtagactttggggttggcccaggaggtcagcctgaagtaataaac
gtcccacttcctgatgctgttcttcttcctggggcttcagtgcagctgccaatgtggtta
cggggaccagatgaagaaggtgttcatgaaattaactttttgttttactatgaaagtatt
aaaagacactcaaaaatgtgtcatagagtattaaggcacactgcagttatttgtactagc
cggtctctgcatattcgagctactgtctgcagaagtaatgcgcttgaagatgaagaaggc
agagggggcaatatgttggtgtttgtggatgtagaaaatatcaatactagtgaaactggc
gttaaagaatttcatatagtgcaagtttcaagtaacagcaagcactggaagcttcaaaaa
tctgttaacatctctgaagacaaagatactaaacttgctagcagagagagagcaaagtta
tgctttaaagcagtaagatgcaaaaactcagaagaaaattacacatttgcagacattgtc
tttggaaatgaacagataataagttcagccagtccttgtgcagactttttttttcaaagc
ttatccactgaatttaaaagaacacatgtgcaatctcatactcatgcatctcaaagggct
gcgaaacaatcatttgatgagacggtcagattgatacaaagatgcagcgaagttgatttg
aacattgtcgtactgtggaaggcatatgttgtggaagacaacaagcagcttattttggag
ggccagcatcatgtcgcccttaatacagttgggaaggaggctttttcgtttcctcagaag
cagggttttaaaaaaatactcgggaattctgattgggaggacttggaacaggaattacca
gaaatggttctcctaaaattttttcgacccgaaaacacaccagtacctgcaagaccaaca
ccagagcagctttctaatcttatcaagacaagtcttcactatccagagtctttcaatcat
tcttttcatcaaaaaagcctctgtctggttcctgtcactctcctactttccaattgttcc
caggctgttgtagatgtgatgattgatttgcggcataaaacaacaagcccagaagcacta
gaaatccatggatcttttacatggcttgggcaaacacagtacaagcttcaacttaaaagc
caggaggtctatagcttgcagctgaaagcttgctttgttcatacaggtgtctataatctt
ggaactcctagagtatttgccaagctagtggaccaagttactttgtttgaaacgagtcag
cagaactccatgcctgcactgattattatcaataatatctga
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integrated database retrieval system
