Strigops habroptila (Kakapo): 115606422
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Entry
115606422 CDS
T08851
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shab03041
]
115606422 (RBFOX1)
Spliceosome [BR:
shab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115606422 (RBFOX1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
SPESP1
Motif
Other DBs
NCBI-GeneID:
115606422
NCBI-ProteinID:
XP_030338133
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All DBs
Position
4:complement(73661139..74913312)
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AA seq
544 aa
AA seq
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MSNSCGSPEDVVKQRGRDGKMRREDVDDSQPEEKRLKLGNEGGNIGKDRGAAAAEEIMPC
LGREEPVPEGGGEGKSVLTTLAASKAEETTQKPHASGAYCFHDQSLLSDTKAECNSCVET
EDRKFSVIFGGGQNFGRILQFQSSKQQMSCEREQLRGNQEATAPPDTMAQPYASAQFAPP
QNGIPAEYTAPHPHPAPDYTGQTTVPEHTLNMYPPAQTHSEQSAADTNAQTVSGTATQTD
DAAQTDGQQQTQSSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNER
GSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNP
VVGAVYSPEFYAGRVLLCQANQEGSPVYSAPSSLVYTSTMPGFPYPAATAAAAYRGAHLR
GRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPATATAAAYSDSY
GRVYAADPYHHTLAPAATYGVGAVNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYSR
FAPY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattcctgtggcagcccagaagacgtggtgaagcaacgaggcagagatggcaag
atgagaagagaggacgtggatgattctcaacctgaggaaaagaggttgaagctggggaat
gaaggaggaaatattgggaaggacagaggagcagcagcagcagaagaaataatgccttgt
ttaggcagagaagagcctgtgcctgaaggaggtggtgaaggcaaaagtgttttgacaacg
ctggctgccagcaaagctgaggaaactacacagaagccccatgcaagtggtgcctattgt
tttcatgatcagagccttctttcagatactaaagcagagtgcaattcctgtgtagaaact
gaggacagaaaattttctgtaatatttggaggtggccagaactttggcaggattttacaa
tttcagagttcaaagcaacagatgagttgtgaaagagaacaactaaggggtaatcaggaa
gctacagcacctcctgacacaatggcacagccttatgcctcagcccagtttgcgccacct
cagaatggtatccctgcagaatacacagccccacatcctcatccagctccagactacaca
ggccaaaccactgttccagagcacacgttaaatatgtaccctcctgctcagacacactct
gaacagagtgcagctgacacaaatgcacaaactgtctccggcacagccacacagacagat
gatgcagcacagaccgatggccagcaacagacacagtcttctgaaaacacagaaaacaaa
tcacagccaaaaaggcttcacgtctcaaacataccattcagattccgggatccagatctt
agacaaatgtttggtcaatttggtaaaatcttagatgttgaaattatttttaatgagcga
ggctcaaagggatttggtttcgtaactttcgaaaatagtgctgatgcggacagggcgagg
gagaaattacacggcaccgtggtagagggccgtaaaatcgaggtaaataatgcaacagca
cgtgtaatgacaaataaaaagaccgtcaacccttacacgaatggctggaaattaaatcca
gttgttggtgcagtttatagtccagaattctatgcaggcagggtgctgctgtgccaggca
aaccaggagggatctcccgtgtacagtgcccccagttcactagtatacacatccacaatg
ccaggatttccctaccctgctgccactgcagctgctgcttacagaggtgcacatctaaga
ggccgaggtcgcacggtgtacaacacgtttcgtgcagcagcacccccccctccgattcca
gcctacggcggtgttgtataccaggatggattttatggtgcagacatttatggtggttat
gctgcctaccggtatgcccagcctgccactgccactgcagctgcctacagtgacagttac
ggacgagtttatgctgcagacccctaccaccacacacttgctccagcagccacctacggc
gttggtgccgtgaatgcttttgcacccttgactgatgccaagactaggagccatgctgat
gatgtcggtctcgttctttcttcattacaggctagtatataccgagggggatacagccgt
tttgctccatactaa
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