Strigops habroptila (Kakapo): 115613343
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Entry
115613343 CDS
T08851
Symbol
CUL4B
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03420
Nucleotide excision repair
shab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115613343 (CUL4B)
09124 Replication and repair
03420 Nucleotide excision repair
115613343 (CUL4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115613343 (CUL4B)
03400 DNA repair and recombination proteins [BR:
shab03400
]
115613343 (CUL4B)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shab04147
]
115613343 (CUL4B)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
115613343 (CUL4B)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
115613343 (CUL4B)
TCR (transcription coupled repair) factors
Cul4-CSA complex
115613343 (CUL4B)
Exosome [BR:
shab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115613343 (CUL4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
115613343
NCBI-ProteinID:
XP_030354540
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Position
9:complement(34325140..34351184)
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AA seq
887 aa
AA seq
DB search
MFPTGFSSPNPPAAAQEVRPATDGNTSSSSSCKKRKLNNSSNSNSEREEFDSISSCASSP
SKNTSSSSSSVISTSSCSSSGVASSNHHLQKKLRFEDSVDFIGLDVKMAEESSSSSSPAA
SSQQQHQQQLKNKSLLISSVAVGHHANGLTKAASSTVSSFANSKPGSAKKLVIKNFKDKP
KLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICED
HIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD
MGLELFRTHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFE
HRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQSTQKPLIATVEK
QLLGEHLTAILQKGLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIV
INPEKDKTMVQELLDFKDKVDHIIDVCFLKNEKFVNAMKEAFETFINKRPNKPAELIAKY
VDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAE
KSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGY
WPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVS
LFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLTKSPKGKDVEDGD
KFTCNDDFRHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSH
NLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccacaggtttctcttcccccaaccccccagctgcagcccaggaggtcagacct
gccactgatggtaataccagcagcagctcctcctgcaagaagagaaagttaaataacagc
agcaacagcaattctgaaagagaagaatttgattccatttcttcctgcgcctcttctcct
tccaagaacacctcctcatcgtcttcctccgtcatctccacctcctcgtgctcctcctca
ggggttgcctcctctaaccatcacctccagaagaagctgcgctttgaggactccgtggat
tttattggactcgatgtgaagatggctgaagagtcctcttcatcctcctctcctgctgcc
tcttctcaacagcagcaccaacaacagctcaaaaataaaagccttttaatttcgtcagtg
gctgtggggcaccatgcaaatggcctgaccaaagctgcctcctctactgtttccagtttc
gccaacagtaaacctggctccgctaagaaattagtgatcaagaactttaaagataaaccc
aaattacctgaaaactacacagatgaaacctggcaaaaactgaaagaagctgtagaagct
atccagaacagtacttcaattaagtacaatttagaggagctctatcaggctgttgaaaat
ctctgctcctacaagatctctgcaaacttgtacaaacaattgagacagatctgtgaagac
cacattaaagcacaaattcaccaattcagagaggattcattggatagtgtcctttttcta
aagaaaatagacaaatgttggcaagatcactgcagacaaatgattatgattagaagtatc
tttttgttcttggaccgaacttacgtacttcagaattcaatgctgccatctatttgggat
atgggtctagaattgttcagaactcatataatcagtgatcagaaagttcagaacaaaact
attgatggcattcttctgctgattgagagggaaagaaatggtgaggctattgataggagt
ttactgcgaagccttctaagcatgctttctgacttacagatttatcaagactctttcgaa
catagattcttggaagagactaaccgtctgtatgcagcagagggacagaggcttatgcag
gaacgagaggttccagaatatcttcaccatgtcaacaagcgcttggaagaagaagcagac
aggataatcacttacttagatcagagcacacagaagccactaattgctactgtagaaaag
caacttctaggtgaacatttaacagccattcttcagaaaggtttaaaccaccttcttgat
gaaaaccgaattcaggacttgtcccttctgtatcaattgttcagccgtgtgagaggcgga
gtacaggttctcttgcagcactggatcgagtacataaaggcatttggtagcaccatagta
attaatccagaaaaagataaaaccatggtccaagaactacttgattttaaagacaaagtt
gaccatattattgatgtttgctttctcaagaatgaaaagtttgtaaatgccatgaaagaa
gcctttgaaacattcattaacaaaagaccaaataagccagctgaactcatagctaaatat
gtagattcaaagcttcgtgcaggcaacaaagaagctactgatgaagaacttgaaaaaatg
ctggataaaattatgatcatatttagattcatatatggaaaagatgtctttgaggccttt
tataaaaaagatctagcaaagagactattagttgggaagagtgcatcagtagatgctgaa
aaatctatgctttccaaactcaaacatgaatgtggagctgctttcaccagcaaacttgaa
ggaatgtttaaagatatggagctttcaaaagacataatgattcagtttaaacagtatatg
caaaatcagaatgtccctggcaacattgaactgacagtgaatattctgactatgggttac
tggccaacctacgtgcctatggaggtccatttgccccctgagatggtaaaactgcaggag
attttcaagaccttttatttaggaaaacacagtggtaggaaacttcagtggcagtcgaca
ttaggacactgtgtactaaaagcagaatttaaagagggcaaaaaagaacttcaggtctcc
ttattccagacgctggtgctgctcatgttcaatgaaggagaggagttcagtttagaggag
ataaagcaagctactgggatagaggacggagagctgagaaggacacttcaatctctggct
tgtggcaaagccagagtactgactaaaagccccaaaggcaaagatgtggaagacggtgat
aaattcacatgtaatgatgatttcagacataagctcttcaggataaagatcaaccaaatt
cagatgaaagaaacggtagaggaacaggcaagcactacagagagagtattccaggacagg
caataccagattgacgctgcaattgtacgaatcatgaagatgcgcaagacactgagtcat
aacctgcttgtgtcggaggtctacaaccagcttaaattcccagtaaagcctgctgacctt
aagaagagaatagaatccttaattgacagggactacatggaaagagataaagaaaacccc
aatcagtacaactatattgcataa
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