KEGG   Strigops habroptila (Kakapo): 115613343
Entry
115613343         CDS       T08851                                 
Symbol
CUL4B
Name
(RefSeq) cullin-4B isoform X1
  KO
K10609  cullin 4
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab03420  Nucleotide excision repair
shab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:shab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115613343 (CUL4B)
  09124 Replication and repair
   03420 Nucleotide excision repair
    115613343 (CUL4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shab04121]
    115613343 (CUL4B)
   03400 DNA repair and recombination proteins [BR:shab03400]
    115613343 (CUL4B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shab04147]
    115613343 (CUL4B)
Ubiquitin system [BR:shab04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     115613343 (CUL4B)
DNA repair and recombination proteins [BR:shab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      115613343 (CUL4B)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      115613343 (CUL4B)
Exosome [BR:shab04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115613343 (CUL4B)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 115613343
NCBI-ProteinID: XP_030354540
LinkDB
Position
9:complement(34325140..34351184)
AA seq 887 aa
MFPTGFSSPNPPAAAQEVRPATDGNTSSSSSCKKRKLNNSSNSNSEREEFDSISSCASSP
SKNTSSSSSSVISTSSCSSSGVASSNHHLQKKLRFEDSVDFIGLDVKMAEESSSSSSPAA
SSQQQHQQQLKNKSLLISSVAVGHHANGLTKAASSTVSSFANSKPGSAKKLVIKNFKDKP
KLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICED
HIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD
MGLELFRTHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFE
HRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQSTQKPLIATVEK
QLLGEHLTAILQKGLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIV
INPEKDKTMVQELLDFKDKVDHIIDVCFLKNEKFVNAMKEAFETFINKRPNKPAELIAKY
VDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAE
KSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGY
WPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVS
LFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLTKSPKGKDVEDGD
KFTCNDDFRHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSH
NLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgtttcccacaggtttctcttcccccaaccccccagctgcagcccaggaggtcagacct
gccactgatggtaataccagcagcagctcctcctgcaagaagagaaagttaaataacagc
agcaacagcaattctgaaagagaagaatttgattccatttcttcctgcgcctcttctcct
tccaagaacacctcctcatcgtcttcctccgtcatctccacctcctcgtgctcctcctca
ggggttgcctcctctaaccatcacctccagaagaagctgcgctttgaggactccgtggat
tttattggactcgatgtgaagatggctgaagagtcctcttcatcctcctctcctgctgcc
tcttctcaacagcagcaccaacaacagctcaaaaataaaagccttttaatttcgtcagtg
gctgtggggcaccatgcaaatggcctgaccaaagctgcctcctctactgtttccagtttc
gccaacagtaaacctggctccgctaagaaattagtgatcaagaactttaaagataaaccc
aaattacctgaaaactacacagatgaaacctggcaaaaactgaaagaagctgtagaagct
atccagaacagtacttcaattaagtacaatttagaggagctctatcaggctgttgaaaat
ctctgctcctacaagatctctgcaaacttgtacaaacaattgagacagatctgtgaagac
cacattaaagcacaaattcaccaattcagagaggattcattggatagtgtcctttttcta
aagaaaatagacaaatgttggcaagatcactgcagacaaatgattatgattagaagtatc
tttttgttcttggaccgaacttacgtacttcagaattcaatgctgccatctatttgggat
atgggtctagaattgttcagaactcatataatcagtgatcagaaagttcagaacaaaact
attgatggcattcttctgctgattgagagggaaagaaatggtgaggctattgataggagt
ttactgcgaagccttctaagcatgctttctgacttacagatttatcaagactctttcgaa
catagattcttggaagagactaaccgtctgtatgcagcagagggacagaggcttatgcag
gaacgagaggttccagaatatcttcaccatgtcaacaagcgcttggaagaagaagcagac
aggataatcacttacttagatcagagcacacagaagccactaattgctactgtagaaaag
caacttctaggtgaacatttaacagccattcttcagaaaggtttaaaccaccttcttgat
gaaaaccgaattcaggacttgtcccttctgtatcaattgttcagccgtgtgagaggcgga
gtacaggttctcttgcagcactggatcgagtacataaaggcatttggtagcaccatagta
attaatccagaaaaagataaaaccatggtccaagaactacttgattttaaagacaaagtt
gaccatattattgatgtttgctttctcaagaatgaaaagtttgtaaatgccatgaaagaa
gcctttgaaacattcattaacaaaagaccaaataagccagctgaactcatagctaaatat
gtagattcaaagcttcgtgcaggcaacaaagaagctactgatgaagaacttgaaaaaatg
ctggataaaattatgatcatatttagattcatatatggaaaagatgtctttgaggccttt
tataaaaaagatctagcaaagagactattagttgggaagagtgcatcagtagatgctgaa
aaatctatgctttccaaactcaaacatgaatgtggagctgctttcaccagcaaacttgaa
ggaatgtttaaagatatggagctttcaaaagacataatgattcagtttaaacagtatatg
caaaatcagaatgtccctggcaacattgaactgacagtgaatattctgactatgggttac
tggccaacctacgtgcctatggaggtccatttgccccctgagatggtaaaactgcaggag
attttcaagaccttttatttaggaaaacacagtggtaggaaacttcagtggcagtcgaca
ttaggacactgtgtactaaaagcagaatttaaagagggcaaaaaagaacttcaggtctcc
ttattccagacgctggtgctgctcatgttcaatgaaggagaggagttcagtttagaggag
ataaagcaagctactgggatagaggacggagagctgagaaggacacttcaatctctggct
tgtggcaaagccagagtactgactaaaagccccaaaggcaaagatgtggaagacggtgat
aaattcacatgtaatgatgatttcagacataagctcttcaggataaagatcaaccaaatt
cagatgaaagaaacggtagaggaacaggcaagcactacagagagagtattccaggacagg
caataccagattgacgctgcaattgtacgaatcatgaagatgcgcaagacactgagtcat
aacctgcttgtgtcggaggtctacaaccagcttaaattcccagtaaagcctgctgacctt
aagaagagaatagaatccttaattgacagggactacatggaaagagataaagaaaacccc
aatcagtacaactatattgcataa

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