Strigops habroptila (Kakapo): 115616065
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Entry
115616065 CDS
T08851
Name
(RefSeq) protocadherin alpha-13-like
Organism
shab
Strigops habroptila (Kakapo)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
115616065
NCBI-ProteinID:
XP_030360739
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All DBs
Position
12:21239471..21242014
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AA seq
847 aa
AA seq
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MGGVCRGALLRLLVLQASWALIGGQVRYSVPEEAKAGTVVGRLAQDLGLEAGEPEARRLR
LVAQGRRASVEVSGALVVSSRLDREELCGKSAPCALRLEVLVERPLRVFHVELEVTDIND
NAPVFPAARKNLSIAESSLPGTRFPLEDASDADVGANAQLSYSLSPSEHFRVEEENSNSR
SKSLFLVLAKPLDRETMPIHRLLLTASDGGRPPLAGTVELVISVLDVNDNAPQFNQSVYS
VLLPEDALEGTLVARVNATDPDFGVYGEVIYEMDTVVPPLASAAFSIDPKRGEIRLTGAL
DFETVTLYNLHVKARDEGTPPLSGHCKVVVEVLDVNDNAPEVWVTSLSLPVPEDAAVGTV
VALLSVSDRDSGANGRVRCSVWPAAPFGLVSTFAGSYSLVLREALDRERVSEYEVEVRAE
DGGAPPLRASRGLRVPVSDVNDNAPAFAQAVYTVLVRENNAAGAELARLWARDPDEAGNG
RVSYSVSEGGGGASVSSYVSVDAESGRLWALQPLDYEELQVLQFEVRAVDAGEPAKCGNA
TVQLFVLDENDNAPALLPPAGGGPGVGAPGSAVPGALWAWASWGAPAGQVVAKIRAVDAD
SGYNAWLRYELWEPRGKGPFRVGLYSGEVSTARALEEADGPRQRLVIVVRDHGEPARSAT
ATLSVSLVEGAEAALAAAGSSGSGLRPAAEGGASATSASATTTNVWLVVAICAVSSLFLL
AVVLYGAARWAPRAAVLSGPGPATLVCASEVGSWSYSQRQSRSLCVADGAGKSDLMVFSP
NFPPPPGPAAKETQPEAPALLDTVSGASSLPFTPLSLSPYALFPLSPFSFARSLGSHGCE
PGSDPRS
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgtgtgtcggggtgcgttgttgcggctgctggtgctgcaggcgtcctgggcg
ttgatcggcgggcaggtgcggtactcggtgccggaggaagcgaaggccgggacggtggtg
ggccggctggcgcaggacctgggcctggaggcgggcgagccggaggcgcgtcggctgcgg
ctggtggcgcagggccggcgggcgagcgtggaggtgagcggggcgctggtggtgagctcg
cggctggaccgggaggagctgtgcgggaagagcgcgccgtgcgccctgcgcctggaggtg
ctggtggagcggccgctgcgcgtcttccacgtggagctggaggtcaccgacatcaacgac
aacgccccggtcttccccgccgcccgcaaaaacctcagcatcgcggaatcgtcgctgccg
gggactcggttccctctggaggacgcgtcggatgcagatgtcggagccaacgcgcagctg
tcctatagcctcagccccagcgagcatttcagagtagaggaagaaaatagtaattcgcgc
agtaaatccctgtttctggtgctcgcgaaacctctggaccgcgagacgatgccgattcac
cgtctgttgctgacggcgagcgatgggggccgcccgccgctggcgggcactgtggagctg
gtgatctcggtgctggacgtgaacgacaatgcgccccagttcaatcagtcggtgtacagc
gtacttttgcccgaagacgccttagagggcacgctggtggcacgggtgaacgccacggat
ccggactttggagtatatggtgaagtgatttacgaaatggatacagttgttcctcccttg
gcgtcagctgcattcagcatcgatccgaagagaggggagattagactgacgggcgccctg
gattttgagaccgttactttatacaacctacacgttaaagctagagatgaagggactccc
ccgctgtcgggtcactgcaaggtggtggtggaggtgctggacgtgaacgacaacgcgccg
gaggtgtgggtgacgtcgctgtcgttgccggtgccggaggacgcggcggtggggacggtg
gtggctctgctgagcgtgtcggaccgggactcgggggcgaacgggcgcgtgcgctgctcg
gtgtggccggcggcgccgttcggtctggtgtcgacgttcgcggggtcgtactcgctggtg
ctgcgggaggcgctggaccgggagcgggtgtcggagtacgaggtggaggtgcgggcggag
gacggcggggcgccgccgctgcgcgccagccgcggtctgcgggtgccggtgtcggacgtg
aacgacaacgcgccggcgttcgcgcaggccgtgtacacggtgctggtgcgggagaacaac
gcggcgggcgcggagctggcgcggctgtgggcgcgggacccggacgaggcgggcaacggt
cgcgtgagctactcggtgtcggagggcggcggcggggcgtcggtgtcgagctacgtgtcg
gtggacgcggagagcgggcgtctgtgggcgctgcagccgctggactacgaggaactgcag
gtgctgcagttcgaggtgcgggcggtggacgcgggggagccggcgaagtgcggcaacgcc
acggtgcagctcttcgtgctggacgagaacgacaacgcgccggcgctgctgccgcctgcc
ggcggcgggccgggcgtcggggcgccgggctcggcggtgccgggggcgctgtgggcgtgg
gcgtcgtggggggcgccggcggggcaggtggtggcgaagatccgcgcggtggacgcggac
tcgggctacaacgcgtggctgcgctacgagctgtgggagccgcggggcaagggcccgttc
cgcgtggggctgtacagcggcgaggtgagcacggcgcgggcgctggaggaggcggacggc
ccgcggcagcgcctggtcatcgtggtgcgggaccacggcgagccggcgcgctcggccacg
gccacgctgagcgtgtcgctggtggagggcgccgaggcggcgctggcggccgcgggctcg
tcggggtcggggctgcggccggcggcggagggcggtgcatcggcgacgtcggcatcggcg
acgacgacgaacgtgtggctggtggtggcgatctgcgcggtgtcgagcctgttcctgctg
gcggtggtgctgtacggggcggcgcgctgggcgccgcgggcggccgtgctgtcggggccc
gggccggccacgctggtgtgcgccagcgaagtggggagctggtcgtactcgcagcgccag
agccggagcctgtgcgtggcggacggcgcgggcaagagcgacctgatggttttcagcccc
aacttccctccgccgcccggccccgcggcgaaggagacgcagccggaggctcccgctctg
ctggacacggtcagtggcgcttcctccctccctttcacgcctctctccctttccccctac
gctctttttcccctgtcgccgttctcgttcgcccgctccttgggcagtcacggatgtgag
ccaggctcagaccccaggtcctga
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