Strigops habroptila (Kakapo): 115616715
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Entry
115616715 CDS
T08851
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115616715 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shab03041
]
115616715 (DDX5)
03009 Ribosome biogenesis [BR:
shab03009
]
115616715 (DDX5)
Enzymes [BR:
shab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115616715 (DDX5)
Spliceosome [BR:
shab03041
]
Complex A
U1 snRNP components
U1 related factors
115616715 (DDX5)
Complex B
115616715 (DDX5)
Ribosome biogenesis [BR:
shab03009
]
Eukaryotic type
Pre-60S particles
Helicases
115616715 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
115616715
NCBI-ProteinID:
XP_030362188
LinkDB
All DBs
Position
14:complement(9062238..9069704)
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AA seq
603 aa
AA seq
DB search
MPGYSSDRDRGFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTVQEVEQYRASKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSR
GDRRDRYSAGKRGGFSSFRERENFERTYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGF
AAAGMQASFRAGNPAGAYQNGYDQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPTS
YSQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgccagggtattccagcgacagggatagagggtttggagccccacgttttggaggaagt
agaggtggacctctctctgggaagaaatttggaaaccccggggaaaaactcacaaaaaag
aaatggaatttagatgaactgcccaaattcgagaagaacttttatcaagaacatcctgat
gtagttagacgtactgtgcaagaagttgaacagtacagagcaagcaaagaagtcacagtc
aggggccataactgtccaaaaccgattattaatttctatgaagcgaacttccctgcaaat
gttatggaagtaattcagaggcagaacttcactgaaccaactgcgattcaagcacaaggt
tggcctgttgcattgagtggattggatatggttggagtggcgcagactggatcagggaaa
acgctgtcttacttactgcctgccattgtgcatataaatcaccagccattcctggagcga
ggagatggacctatttgtcttgtgcttgcaccaactcgtgaactggctcagcaagtgcag
caggtagctgctgagtacagcagagcatgccgcttgaagtctacctgtatttatggaggt
gctccaaagggaccacaaattcgtgacttggaaagaggtgtggaaatctgcattgcaaca
cctggaagacttatagacttcttagaagctggaaagaccaatctcaggaggtgtacttac
cttgtccttgatgaagctgacaggatgcttgacatgggatttgaacctcagatcagaaaa
atcgtggatcagataagacctgacaggcagactctgatgtggagtgccacatggccaaag
gaggtgcggcagctggctgaagacttcttgaaagaatatgtacacatcaacattggtgct
ttagagcttagtgcaaaccacaacattcttcagattgtggatgtgtgtcacgatgtagag
aaagatgacaagcttattcgcttgatggaagaaatcatgagtgagaaggaaaacaaaaca
attgtctttgtggaaaccaaaagacggtgtgatgaccttaccaggaaaatgaggagagat
gggtggccagcaatgggtattcatggtgataaaagtcagcaggagcgggactgggttcta
aatgaattcaaacatggaaaagcaccaatcctgattgctacagatgttgcatccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattc
tttactcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgggaggctaat
caagccatcaaccccaaattgcttcagctgattgaagacagaggttcaggtcgttcccga
ggtgatcgacgtgacagatattctgcgggcaaaaggggtggatttagtagttttagagag
agggagaactttgagagaacctatggtgctctaggcaagagagactttggagcaaaaacc
caaaacggggcctacagcgcccagagtttcagtaatggaactccttttgggaatggcttt
gcagctgcaggcatgcaggccagcttcagggccgggaaccccgcaggagcttaccagaat
ggctatgaccagcagtatgggagtaacattgcaaatatgcacaatggcatgaaccagcag
cagtacgcgtaccccgccactggggctgctcctatgataggttacccgatgcccacaagt
tattctcaataa
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