Strigops habroptila (Kakapo): 115617390
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Entry
115617390 CDS
T08851
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04120
Ubiquitin mediated proteolysis
shab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115617390 (UBE4B)
04120 Ubiquitin mediated proteolysis
115617390 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115617390 (UBE4B)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115617390 (UBE4B)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
U-box type E3
115617390 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
115617390
NCBI-ProteinID:
XP_030363668
LinkDB
All DBs
Position
16:complement(4157897..4197492)
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AA seq
1310 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPSSQPTTPLTSPQRETPPGPPVVAPAPGPSHSLGLNVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
NSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQSRDENPFASLTATSQPIAAAARSPD
RSLILNMGSNPGSSPMFCNVGSFGSSSLSSLYGTSPAPTTNFTSYVPMTGSSLTPPASSV
ATTSVPSITVSSHLTATSPSWMQPSSPRYRPYTVTHSGGFSASSIPRSSSISIPSSSPSP
PAMAASPPAMPLTPSRQRPTTMGPPLFTASPSTLRRRSSLLNRIPSSIGGSGSSSVSDSC
SDHFTIENCKETEMLNYLIECFDRVGIEERKAPKMCSQPTVSQLLSNIRSQCISHAALVL
QGSLTQPRSLQQQSLLVPYMLCRNLPFGFIQELVRTTYQDEEVFKQIFIPILQGLAVASK
ECSLDSDNFKYPLMALCELCEIKFGKTHPMCSLVVSLPLWLPKSLSSGAGRELQRLSYLG
AFFSLSVFAEDDNKVVEKYFSGPAITLENTRVVSQSLQHYLELARQELFKILHSILLNGE
TREAALNYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPMYIF
HPRCRIDLPTDETRVKAAMEDVAAWIAELYRDPSPFSEPKFPTECFFLTLHAHHLSILPS
CRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADA
GLLDENFLRRCLNFYGMVIQLMLRILDPAYPNIKLPLTPEVPKVFAALPEFYVEDVAEFL
FFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKF
FEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGT
FMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPREQQQAR
QSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPK
CRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRK
AGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTI
MDRSIILRHLLNSSTDPFNRQTLTENMLEPVPELKEQIQAWMRDKQNADH
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagtgcggatgagatccgtcggcggcgcctggctcggctggcgggggga
ccatcttcccagcctactacaccgcttacatcaccgcagagagagaccccgcctggacct
cctgtagtagcaccagccccagggccatcccatagtctaggcctaaatgtccatagcatg
accccagctacctctccaattggggcatcaggagtagcccaccgaagccagagcagcgaa
ggagtgagttcactcagcagttctccatctaacagccttgaaacacaatctcagtctctc
tctcgatcgcagagcatggatattgatagtgtctcctgtgagaaaagtatgtcccaggta
gatgtggattcaggaattgaaaacatggaggtggatgagaatgatcgcagagagaaaagg
agcctgacggataaggaacctctgtctgggtctgaagtgtctgaggaacaagctttacag
ctggtctgtaagatcttcagagtctcttggaaggaccgagacagagacgttatcttcctg
aattcactctctgcccagtttaagcagaacccaaaggaagtgttttcagattttaaggac
ttgatcgggcagattctgatggaagtgctgatgatgtccacccagtcgagggatgaaaac
ccctttgccagcctgacagctacatcccaaccgatcgctgcagctgcccgctctcctgac
agaagcctgattctaaacatgggctctaacccaggaagcagccccatgttctgtaatgtg
ggctcctttggttccagttcattgtccagtctctatgggactagtccagctcctactacc
aatttcacaagctatgtaccaatgactggttcatctcttaccccaccagccagttcagtt
gccactacatctgtgccttccattactgtcagctctcacctcacagcaacaagcccttct
tggatgcagccttcttctccgaggtaccgaccgtacactgttacccattctggaggcttt
tcagcttcttccatcccacgttcctcgagtatttccatcccatctagttcaccaagtcct
ccagccatggctgctagccctccagccatgccactcaccccatccagacagagacccaca
acaatgggtccacctttgtttactgcttcacccagtaccttgcgcaggcgttcttcttta
ctgaacaggattccttctagtattggaggctctggcagctcaagtgtttccgattcctgc
agtgaccacttcaccattgaaaattgtaaggagacagagatgctgaactacctcattgag
tgttttgacagagttggaatagaggagagaaaagcaccaaagatgtgtagccagccaaca
gttagccagttactgagcaacatccgatcccagtgcatttcacatgctgctttggtgcta
cagggatccttgacacaaccaaggtcgttgcagcagcagtctttgctggtaccatatatg
ctgtgtaggaatctcccatttggcttcatccaagaattggtgagaacaacttatcaggat
gaagaggtgttcaaacagatctttattcccatcttacaaggcctggctgtagcttccaaa
gagtgctcccttgatagtgacaattttaaatatccccttatggcactatgtgaactttgt
gaaatcaagtttgggaaaacacaccctatgtgcagtttggttgtctctttgcccttgtgg
ctgcctaaatctttaagctcgggtgcaggaagagagctgcaaagactttcctatcttgga
gccttcttcagtctctctgtctttgctgaagatgataacaaagtagttgaaaagtacttc
tcagggcctgccattactcttgaaaacactcgggtggttagccagtctttgcaacattac
ctggaattagcaaggcaagagctgttcaagatcctacacagtattttgctgaatggtgaa
actcgagaagcagctctcaattacatggcagctgttgtcaatgccaacatgaaaaaggca
caaatgcagacagatgaccgtttggtatctacagatggctttatgctcaacttcctatgg
gtactacagcaactaagtacgaagatcaagctggaaacggttgatcccatgtacatattc
catcccaggtgtcgtattgacctcccaacagatgagaccagagtgaaagcagcaatggag
gatgttgcagcctggatcgctgaactttacagggatccatctccattttctgagccgaaa
ttcccaacagaatgtttcttcctaaccctgcatgcccatcatctctcaatcctgccaagc
tgccgccggtacatacgcaggctgcgggccatccgggaactcaacaggactgttgaagat
ttgaagaacaatgaaagtcaatggaaggattctcctctggctaccaggcatcgagaaatg
ctgaaacgttgcaagacacagctcaagaaactggtgaggtgcaaggcttgtgcagatgct
ggtttgctggatgaaaactttctcaggagatgtctgaatttctatggcatggtgattcag
ctgatgcttcgcattcttgaccctgcctatcccaacataaaattgcctttaactcccgaa
gttccgaaggtatttgctgcattgccagagttttacgtggaagatgttgctgagttttta
ttttttattgtacaatatgctcctcaggtgctttacgagccctgtactcaggacatagtg
atgttccttgttgtgatgctctgcaaccagaactacatccgaaatccttatttagtagcc
aagctggtggaagtgatgttcatgacaaatccagctgttcagcctcggactcaaaagttc
tttgaaatgattgagaatcatcccctctccaccaaattgttagtgccctccttgatgaag
ttttacacagatgttgaacatactggagccacgagcgagttctatgacaagtttacaatc
cgctaccacatcagtaccattttcaagagcctctggcagaatatagctcaccatggtacc
tttatggaagagttcaactcggggaagcagttcgttcgctacatcaacatgctgataaat
gacacaactttcttgctggatgagagtctggagtccctaaaacgtatccatgaagtgcaa
gaggagatgaagaataaagaacaatgggacctgctgcccagggagcagcagcaggctcgg
cagtcccagctggctcaggatgaacgtgtctctcgttcatatcttgccctggcaacagaa
accgtggatatgttccacatccttaccaagcaggttcagaagccttttctcagacctgaa
ctcggaccacgactggctgctatgttgaactttaacttacagcaactgtgtggccccaag
tgccgtgacctgaaagtcgaaaaccctgagaaatacgggtttgaaccaaagaagctgttg
gaccaactgactgacatttacctacagctagactgtgctcgcttcgctaaagcaattgct
gatgatcagaggtcctacagtaaagagctctttgaggaggtgatctccaagatgaggaag
gctggaatcaagtcaaccatagcaatagagaaattcaaactgctggcagagaaagtggag
gagattgttgccaagaatgcccgtgcagaaattgattacagcgatgctccggatgaattc
agagacccacttatggacaccctgatgactgatcctgtgaggctgccctctggaactatt
atggacaggtcaatcatcctgaggcatctgttgaactcttccactgaccctttcaatcgt
cagacgctgacagaaaatatgctggaaccagtgccagaacttaaagagcaaatccaagcc
tggatgagagacaagcagaacgctgaccattaa
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integrated database retrieval system
