Strigops habroptila (Kakapo): 115619290
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Entry
115619290 CDS
T08851
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shab03036
]
115619290 (CHD7)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115619290 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
115619290
NCBI-ProteinID:
XP_030367191
LinkDB
All DBs
Position
1:complement(37519722..37653212)
Genome browser
AA seq
3012 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENTVNPMGQQMPMDQGFPSLQSSLHHPPAN
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMISNAPGNGIASPHSQYHNPPVPQVPHGSGAG
GQMGVYPSMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQQQPQPTQPPQAPSGP
PGQGHPQHMQQMGNYMARGDFSMQQHGQPQQQRMNQFSQGQEGLNQGNPFIATSGPGHLS
HVPQQNPSMAPSLRHSVQQFHHHPPAALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRS
QTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSN
SGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPG
SAGIPMEVGNYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQNRPFMGMSSTPREMGGHMR
PNGCPGVGLADPQAIQERLISGQQLPSQQQSFQQQMPTCPPMQPHPGMHHQSSPPPHPHH
QPWAQLHQSPQNTPQKVPVLQHSPSEPFLEKPVPDMTQVSGSNTQLVKSDDYLPAIEPQP
QQKKKKKKNNHIAAEGPSKGFGKEDFPGGPDSQNLSRNSVDCSQEEKKKKKKPKTKKEPK
DPKEPKEKKEPKTPKVPKTPKEPKEKKAKNTTPKPKTSKKTSNKKPDSETSAAKKKGNKG
KEGSENSDLEKTPPPSPHPEDEDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAA
GRDSPSNTSQSEQQESADAEGPVVEKIMSSRSVKKKMENGEEVEVEEFYVKYKNFSYLHC
QWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEVDRILDFSRSTDDNG
EPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMERVERPPADDWKKSES
SREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGP
FLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFH
AIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQ
NTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNL
APKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLI
NGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRC
LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAA
DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV
LQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTI
TIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRV
RKQTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNLLVYGW
GRWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRA
LVNHSGLSAPVPRGRKGKKVKAQSSQPMLQDADWLTTCNPDVLFQEDSYRKHLKHHCNKV
LLRVRMLYYLRQEVIGDQADKILEGADSSEIDVWIPEPFHAEVPADWWDKEADKSLLIGV
FKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYK
PTRTPFKDEIDEFANSPPEDKEESVEIHPNKHGESNSELGQLYWPNTSTLTTRLRRLITA
YQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVS
TFGIIFDPVKHQFDWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPNDEPPDL
STMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDKD
LLIGAAKHGVSRTDYHILNDPELSFLEAHKNFAQNRGTGNTNTVSSVNPLGAGCSQTPPA
VPSAPIQEEKTTEQMESKVEGSENPAAKEKSDIKEETDIADKDTKPDCDAEAEPGSVKCE
LKDIEMSTDVDPKSISEKGSEEDEEEKMDDDDKSEESSQPEAGAVSQGKNFDEESNASMS
TARDETRDGFYMEDGDASVVQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRR
QMFDFQGLIPGYTPTAVDSPLQKRNFAELSMVGQASASGSEDITVSPQLSKEDALNLSVP
RQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREAASSTSN
FSSVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLIDGEPPMKRRRGRRK
NVEGLDLLFMSNKRTSLTVEDAEVTKAFEEDMEALPARNIPSPGQLDPDTRIPVINLEDG
TRLVGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKLD
INTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPE
SMFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLTS
LQNLQNLQSLQLAGLMGFPPGLATAAAAGGDTKNPAAMLPLMLPGMAGLPNMFGLSGLLN
NPITATTGNATTASGQGETEDGASKAEEKKNENEEENKDSEKSTDTVSATDSANGSVSAA
TAATTATATTTTTTNTGLPTNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALA
GLQNAVGSNEEKATDKTEGTAFKDEENLEGSDAEESLDKTADSSVLEDEIAQGEELDSLD
GGEEIENNENDE
NT seq
9039 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctgtttggagaagatgggaatattttcagtgaaggg
ttggaaggtcttggagaatgtgggtatcctgaaaatacagtgaatcctatggggcagcaa
atgcccatggatcaaggatttccctctttacagtcatctcttcatcatccccctgcaaat
caaaatcaggccaagttgacccattttgatcactataatcaatacgaacagcagaaaatg
cacctgatggatcagccgaacaggatgataagcaatgcccctgggaatggtatagcatct
cctcattcacagtatcacaaccctccagttcctcaggttcctcacggcagtggtgctggt
ggtcagatgggagtctatcccagcatgcagaacgaaagacacgggcagcccttcgtagac
agtggctccatgtggggcccacgggcagttcaagtgccagaccagatacgagcaccatac
cagcagcaacagcagcagcaaccgcaaccgacacagccgccgcaggcaccctccggcccc
cctgggcagggccatcctcagcacatgcagcagatgggaaactacatggctcgcggtgat
ttttcaatgcagcagcatgggcagccgcaacagcagaggatgaaccagttttctcaaggc
caagaaggcctcaatcagggaaaccctttcattgccacctcaggacctggccacttgtct
catgtgccccagcagaatcccagtatggcaccttccttgcgacactcagtccagcaattt
caccaccatccccccgctgctctccatggagaatcagtagcccacagtcccagattctcc
cctaatcctccccagcagggtgctgttaggccgcaaacacttaattttagttctcggagc
cagacggtaccctcacctactataaacaactcagggcagtattctcgatatccttacagt
aaccttaatcagggattagttaataatacagggatgaatcagaatttaggccttacaaat
aacactccaatgaatcaatctgtaccaagatacccaaatgctgtcggatttccatcaaac
agtggtcaaggactaatgcaccagcagcccatccaccctagtggctcacttaaccaaatg
aacacgcaaactatgcacccttcacagcctcagggaacttatgcctctccacctcccatg
tcacctatgaaagcaatgagtaatccagcaggtacacctcctccacaggttagacctggt
agtgctggaataccgatggaagttggcaattatccaaatataccccatcctcagccgtca
caccagccccctggtgccatgggaattggacaaaggaatatgggcccccgaaacatgcaa
cagaatcgtccgtttatgggtatgtcttcgacaccacgggagatgggtgggcacatgaga
ccaaatggttgtccaggtgttggccttgcagatccacaagcaatacaagagcgactaata
tctggccagcagctccctagtcaacagcagtcttttcaacagcaaatgccaacctgtcct
cccatgcagcctcatccagggatgcatcatcagtcttcaccacccccacatcctcatcat
cagccttgggcacagcttcaccagtcaccacaaaacacaccacaaaaagtgcctgtcctt
cagcattctccgtcggaaccctttttagagaaaccagtgccggatatgactcaggttagt
ggatcgaatacccagctagtgaaaagcgatgattatctgccagcaatcgagccgcagcca
cagcaaaagaaaaagaaaaagaaaaacaatcacattgctgcagaaggtcccagtaaaggt
tttggtaaggaagactttcctgggggacctgacagccagaatctaagcagaaactcagtg
gattgctcgcaagaagagaagaagaaaaagaaaaagcccaagacaaaaaaagaaccgaag
gatcctaaagaacccaaggaaaagaaggaacccaagacccccaaagtccctaagacccca
aaagagccaaaggaaaagaaagcaaaaaataccacaccaaaacccaagaccagcaaaaag
acaagtaacaagaaaccagattcagaaaccagcgctgcaaagaaaaaaggtaacaaggga
aaggaaggttctgaaaattcagatttggaaaaaactccaccaccatcacctcatcctgaa
gatgaagatgacccaggggttcagaagcgacgctccagcaggcaggtgaagaggaagcgt
tacacagaagacctggagttcaagatttcagatgaggaggctgatgatgctgatgctgct
ggaagagactctccttcaaacacttctcagtcagagcaacaggaatctgctgatgctgaa
ggccctgttgtggagaagataatgagtagccgttcagtcaagaaaaagatggagaatgga
gaggaggtagaagtagaggagttctatgtaaagtacaaaaacttctcttaccttcattgt
cagtgggcatctgtggaagagctggacaaagacaagagaattcagcagaagataaagcgg
tttaaggcgaaacagggccagaacaaattcctttcagaaattgatgatgagctttttaat
ccagattatgtcgaagttgatcgaatcttggatttttcacgtagcacagatgataacgga
gagcctgtaacacattatctggtgaaatggtgttcacttccttatgaagacagcacttgg
gagctcaagcaagacatcgaccaagctaagattgaagagtttgagaaactgatgtctagg
gagccagaaatggagcgtgtggagcgacctcctgccgatgactggaagaaatcggagagt
tccagggagtataaaaacaataacaaactcagggaataccagttggagggagtaaactgg
cttcttttcaattggtacaacacacgaaactgcattttagcagatgaaatggggttggga
aagactatccagtccattacgtttctctatgagatatatttgaaaggaatccatggtcct
ttcttggttattgcaccgttgtccacaattcccaactgggaaagggagttccgcacctgg
acagaattgaatgtggttgtgtatcatgggagtcaagcaagccggcggaccattcagttg
tatgaaatgtatttcaaagatccacagggtcgtgtgataaagggatcctacaagttccat
gccattatcacaacatttgaaatgatcttgactgactgcccagagctgcgcaatattcca
tggcgttgcgtagtcatcgatgaggcccacaggctgaagaacaggaattgcaagctattg
gaaggactcaagatgatggacctggaacataaagtgctgcttactggaacccctttgcaa
aatacagtagaagagctgtttagcttgcttcacttcttggaaccaggtcgcttcccatca
gaaaccacattcatgcaagaatttggtgatctgaaaactgaagaacaggtgcaaaaactc
caagctattttgaagccgatgatgctgagacgtctcaaggaggatgtagaaaagaacctg
gcccccaaagaggaaaccatcattgaagttgagctgacaaatattcagaagaaatactac
cgtgctattcttgaaaagaatttcacatttctttccaagggtggaggtcaggcaaatgta
cctaatcttttaaacactatgatggaactaaggaaatgctgcaatcatccgtaccttatt
aatggtgctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactctcca
gattttcagctccaggcaatgatccaggctgctggcaagctagtactgattgacaagctg
ctgccaaaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgc
ttggacatactggaagactacctcattcaaagacggtacccatatgaacgaattgatggc
cgagtaagaggcaacttgcgtcaggcagctatcgacagattttcaagacctgattctgat
aggtttgttttcctgctgtgtacaagggcaggaggtttgggcattaatcttactgctgct
gatacctgcatcatttttgattcagactggaacccccaaaatgacctccaggctcaagca
cgatgtcacagaataggacaaagcaaatcggtgaaaatttacaggttgataacaaggaac
tcttacgaaagggaaatgtttgacaaagctagcttgaagcttggccttgataaggctgtg
ctacaatctatgagcggaagagaaaatgctacaaatggggtgcaacagctttctaagaaa
gaaatagaagatcttcttcgaaagggggcatacggtgctctgatggatgaggaagatgaa
gggtctaagttctgtgaagaggatattgatcagattctcttaaggcgaacacacacaatt
actattgagtctgaaggaaaaggctcaacatttgcaaaggctagttttgttgcatctggg
aacaggacagacatttccttggatgatcctaatttttggcagaagtgggcaaagaaagct
gagctggatattgatgctttaaatggaaggaataacctagttattgatacaccaagagta
agaaagcaaaccagactctacagtgcagtcaaagaggatgaactgatggagttttcagac
ctggaaagtgattctgaagaaaaacctagcacaaagccccgtaggcctcaggataaatca
cagggttatgcaagaagtgaatgtttcagggtggagaagaacttgttggtttatggttgg
ggtcggtggactgacatcctctcacatgggcgctataaacgtcagctaacagaacaagat
gtggaaaccatctgccggactatcctggtgtattgtcttaatcattacaaaggggatgaa
aatatcaaaagtttcatctgggatctgatcactccaactgcagatgggcaaactcgagct
ttggttaatcattccggtctgtctgcaccagtgcccagggggaggaaaggcaaaaaagta
aaagcccagagttcacagccaatgctgcaagatgctgattggctcacaacctgtaatccg
gatgtgttatttcaagaagacagctataggaaacatctcaaacatcactgtaataaggtc
ctgctgcgtgtccgcatgctctactatctacgacaagaagttataggggaccaagcagac
aagatcttagagggtgctgactcaagtgaaatagatgtatggatacctgagccattccat
gctgaagttcctgcagactggtgggataaggaggcggataaatccctcttaattggagta
ttcaaacacggttatgagaagtacaattctatgagagctgatccagcactgtgctttctg
gaacgggttggcatgcctgatgcaaaggccatagctgctgagcagagagggacagacatg
ttagcagatggcggtgatggtggtgaatttgacagagaggatgaagatccagaatataag
ccaaccagaactcctttcaaggatgaaattgatgaatttgcgaactcacctccagaagac
aaagaggagtccgtagaaatacacccaaacaagcacggtgaaagcaactctgagttaggc
caactgtactggcccaacacttcaaccctgactacccgtctgcgtcgcctcattactgcc
tatcagcgcagctataaaaggcaacaaatgaggcaagaggcactaatgaagactgaccgc
aggagacgccggcctcgggaagaagtgagggcactggaagcagaaagggaagctataata
actgaaaaacggcaaaaatggacaagaagagaagaagctgatttttatcgtgtagtgtct
acttttggaattattttcgatcctgtaaaacatcaatttgactggaatcaattcagagca
tttgccaggcttgataaaaagtccgatgaaagcttggagaagtattttaatggctttgtg
aatatgtgtagacgagtgtgccgaatgccagtcaaaccgaatgatgaaccacctgatctt
tccacaatgattgagcccatcacggaagagcgtgcttctagaactttgtaccgcatcgaa
ctgctgcggaaaatccgtgaacaggttctccatcacccacagttaggggagaggctaaaa
ctttgccagccaagcttggacctgccagagtggtgggagtgtggtaaacatgataaagac
ttactgattggtgctgctaaacatggagtcagtaggacagattatcacattctgaatgat
cctgaactctcttttcttgaggctcacaaaaactttgctcaaaacagagggactggcaat
acaaatactgtctcttctgtaaaccctctgggtgctggctgcagtcagacaccacctgct
gtcccatccgcacccatacaagaagaaaagactacagaacaaatggagtctaaagttgaa
gggtctgaaaatccagcagccaaagaaaagtctgatatcaaagaggagacagatattgcg
gataaggacactaaaccagactgtgatgctgaagctgagcctggctctgttaaatgtgaa
ttgaaagacatagaaatgagtacagatgtagacccaaaatctatttctgagaaaggttca
gaagaagacgaagaggagaaaatggatgatgatgataaatcagaagaatcctcccaacct
gaagcaggagcagtttctcagggtaagaattttgatgaagaaagcaatgcctctatgagt
accgcaagggatgaaacacgcgatggattctacatggaagatggggatgcatctgtggtt
cagctgcttcatgaaagaacatttgccttctctttctggcctaaggaccgagtaatgatc
aaccgattagacaacatctgtgaagcagtgctgaaagggaagtggccagtaaataggcgc
cagatgtttgatttccaggggctcatacctgggtatactccaacagctgtggacagccct
ctacaaaaaaggaactttgcagagctctccatggttggtcaagccagcgccagtggcagt
gaagatatcactgtttctcctcagttatcaaaggaagatgcactcaatttatcggttcca
cgtcagaggaggaggagacgaagaaagattgaaattgaggctgagagagctgccaagagg
agaaatcttatggaaatggttgcccagttacgtgagtctcaggtggtctcagaaaatgga
caagaaaaggttgtagatttatcaaaggcctcacgagaggcagcaagttctacctcaaat
ttttcatctgttacttcaaagtttatcttgcctaatgtctccacacccgtgtctgatgcc
tttaaaactcaaatggagctgctgcaagcaggtctttcacgcacacccacaaggcatcta
ctaaatggctctttaatagatggagaaccgcccatgaagagaaggagaggaaggaggaaa
aatgtagaagggcttgatctgttatttatgagcaacaaacggacatcactgactgtagag
gatgcagaagtgaccaaagcttttgaagaagatatggaagccctgccagcaaggaacatt
ccatctcctggtcaattggacccagacactcgcatccctgtaatcaatctggaggacggg
accaggctggtgggagaggatgctcctaaaaacaaggatttagttgaatggcttaaattg
catcctacttacactgtagatatgccaagttatgtaccaaagagtgcagatgtgctgttt
tccccatttcagaagccgaaacaaaaacgacacagatgtcgaaaccctaataaactggat
ataaacaccttgacaggagaagaaagggtacctgttgtaaataagcgaaatggaaagaag
atgggtggagctatggcccctccaatgaaggacttgccaagatggctggaagaaaatcct
gaatttgctgttgctccagattggactgacattgttaaacagtctggttttgttccagag
tccatgtttgaccgtcttctcactggacctgttgtgagggaggaaggagcaagcagaaga
ggaaggcggccaaaaagtgaaattgccaaagcagctgcagcagctgctgctgtagcatca
acttcgggaatcaacccactactaatgaacagtctgtttgctggaatggacctcacaagc
ctccagaacctacagaacctgcagtctctccagcttgcaggcctcatgggcttcccgcca
gggctagcaacagctgctgctgctgggggggatactaaaaatccagctgccatgttgcct
ctgatgttgccagggatggcaggattacctaatatgtttggactaagcggattgttgaat
aacccgataacggctactactggaaatgccactactgcttccggtcaaggagagactgag
gatggcgcttcaaaagctgaagagaagaaaaacgagaatgaagaggagaacaaagactct
gagaaaagcacagacactgtttctgctactgactctgcgaatggatctgtcagtgctgct
actgcggcgacgaccgccactgccaccactaccaccaccaccaacactggattgcccaca
aaccctctggccttcaatcctttcctgctgtctaccatggctcctggcctcttctatcca
tctatgtttctacctccaggactgggaggattgactctgcccggtttcccagcactagca
ggacttcagaacgcagtgggctccaacgaagagaaggctactgacaaaactgaaggaact
gcctttaaagatgaagaaaatctcgaaggcagtgatgcagaggagagccttgataaaact
gcagattcctccgttttagaagatgaaatagcacagggtgaagaattagactcacttgat
gggggggaagaaatagaaaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
