Spiribacter halobius: LMH63_12105
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Entry
LMH63_12105 CDS
T09389
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
shai
Spiribacter halobius
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shai03009
]
LMH63_12105
Enzymes [BR:
shai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
LMH63_12105
Ribosome biogenesis [BR:
shai03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LMH63_12105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ub-Mut7C
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
UEX76696
LinkDB
All DBs
Position
complement(2657668..2658636)
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AA seq
322 aa
AA seq
DB search
MPAVQHIEISQDLSGQRIDNYLMRVLKGVPRTRIYRLLRKGEVRVNGRRARPTYRLAAGD
RLRLPPVRTGQGAVSSASDHVLERLRASILYEDEHVLVVDKPSGLAVHGGSGLAYGVVEA
LRQLRPEQPLLDLAHRLDRDTSGCLVLAKRRPALRALHALLRDGQVEKRYLALLHGDPGR
QPRVVAEPLARRNGPGGETVMRVAADGKPSRTVFRALSRHAGWTLVEARLETGRMHQIRV
HAAHIGHPVAMDPKYGDPEADQALRRLGLKRLFLHAAGLRFQLPGQAVIDVSAPLPPALH
DVLRCLGENGDNREGAKGAKGE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgtccagcacatcgagatctcacaggacctctccgggcagcgcatcgacaat
tacctgatgcgcgtgctcaagggcgttccgcgcacgcgtatctatcgactgctgcgcaag
ggggaggtgcgggtcaacggccgccgggcccgccccacgtatcgccttgccgccggcgat
cggctgcgcctgccgccggtgcgcacggggcagggggccgtcagctcggcctcggatcat
gtgctggagcgcctgcgcgcctcgatactctacgaggacgagcacgtgctggtggtggac
aagccatcggggcttgccgtccatggcggctcgggcctcgcctatggcgtcgtggaggcg
ctgcggcagctgcgaccggagcagccgttgctggatctggcacaccgcctggaccgtgat
accagtggctgcctcgtcctcgccaagcgccgcccggcgttgcgcgccctgcacgcgctg
ctgcgtgacggccaggtggagaagcggtatctggccctgctgcatggcgatccgggccgg
cagccccgggtggtggccgaaccgctggcgcggcgcaacggccccggcggcgagaccgtc
atgcgcgtcgctgccgacggcaagccttcgcgcacggtgttccgcgccctgagtcggcat
gcgggctggaccctggtggaagcccggctggagacggggcgtatgcaccagatccgcgtc
catgccgcgcacattggccacccggtggccatggacccgaagtacggcgaccccgaggcc
gaccaggcgctgcggcggcttggcctgaagcgcctgttcctgcacgccgccggcctgcgc
ttccagctccccggccaggcagtgatcgacgtctcggcgccgctgcctccggcactccat
gatgtgcttcgttgtctcggggagaacggggacaaccgcgaaggcgcaaagggcgcgaag
ggagaatag
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integrated database retrieval system
