Shewanella halotolerans: K0H81_10490
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Entry
K0H81_10490 CDS
T09172
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
shao
Shewanella halotolerans
Pathway
shao01501
beta-Lactam resistance
shao01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0H81_10490
01503 Cationic antimicrobial peptide (CAMP) resistance
K0H81_10490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shao02000
]
K0H81_10490
01504 Antimicrobial resistance genes [BR:
shao01504
]
K0H81_10490
Transporters [BR:
shao02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0H81_10490
Antimicrobial resistance genes [BR:
shao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0H81_10490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
DUF6286
Motif
Other DBs
NCBI-ProteinID:
QYJ88260
LinkDB
All DBs
Position
complement(2456609..2459737)
Genome browser
AA seq
1042 aa
AA seq
DB search
MILTDLSVKRPVFASVISMLLIAFGLVSFEKLPLREYPNIDPPIVSVQTNYRGASAAVVE
SRITQLVEDRISGVEGIRNINSSSSDGRSSVTLEFDVGRDIEAAANDVRDRISGLLNNLP
EEADPPEVQKANGGDEVIMWLNLVSDQMNTLQLTDYARRYLVDRFSVIDGVANIRIGGGK
VYAMRVWIDRQALAARNLTVSDIESVLRSENVELPAGSVESQDRHFTVRLERTFKTAEDF
NNLVLAEGEDGYLIKLGDVARVEIGSEEERITFRGNREAMIGLGISKQSTSNTLEVARAA
NALVDKINPTLPAGMEIKRSYDSSVFIEASIKEVYQTLFIAMFLVIVVIYLFLGSVRAML
IPALTVPVSLMATFIVLYALGYTINLLTLLAMILAIGMVVDDAIVVLENIHRRIEEGDSP
LKAAFLGSREVAFAVVATTLVLVAVFMPITFLEGDLGKLFKEFAVAMSAAVIFSSLVALT
LSPMMCSKLLKPAGQDPWLVRKIDAGMNWLSAGYRATLKRAMVHPFIVSSLVVIALGLSG
YLMTKVPQEFAPREDRGSMFLIVNGPQGASFEYISPYMDEIENRLMPLVDSGEIKRLLIR
APRGFGRSANFSNGMAIIVLEDWADRRSAFEIIGDIRARLSDLAGVRAFPVMRQAFGRGV
GKPVQFVLGGPSYEELAKWRDILLEKAKENPNLVGLDHDYQETKPQLRVVIDKDRAADLG
VSISHIGRTLESMLGSRLVTTFMRDGEEYDVIIEGNRDNQNTASDLSNIYVRSDRSRELI
PLANLVSVEEFADASQLNRYNRMRAITIEANLADGYSLGEALEYLNNLAYTYLPAEAVIS
YKGQSLDYQESGSSMYFVFLLALGIVFLVLAAQFESYVHPMVIMLTVPLATLGALIGLWL
TGQSLNIYSQIGIIMLVGLAAKNGILIVEFANQLRDKGIAFETAIIQAASQRLRPILMTG
ITTAAGAIPLVLAQGAGAETRFVIGVVVLSGIILATFFTLLVIPVAYGLIARNTGSPEEI
SQRLEAELAQDQHHESGLRNAD
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgatcttgacggatttgtcggtaaaacgaccggtttttgcgtccgtcatcagcatgtta
ttaatcgccttcggtctggtctctttcgaaaaactccccctgagggagtatcctaatatc
gatccgccgatcgtctcggtgcaaaccaactatcgcggtgccagtgccgccgtggtggag
agtcgcatcacccagctggtggaagacaggatcagcggcgtcgaagggatccgcaacatc
aactcctccagcagcgatggtcgctcttccgtgaccctggaattcgacgtcggtcgtgat
atcgaggcggcggccaacgatgtccgcgatcgcatctcgggtctactcaacaacctgccg
gaagaggccgatcccccagaggtgcaaaaggccaatggcggcgatgaggtgatcatgtgg
cttaacctggtctcggatcagatgaacaccttgcagctcaccgactatgcccgccgttac
ctggtagatcgcttctcggtgatcgatggtgtggcaaatattcgtatcggtggcggtaag
gtgtacgccatgcgggtgtggatcgacagacaggccctggcggcccgtaacctgacggta
tcggatatcgaatctgtgctgcgctcggagaacgtcgagctgccggctggttcggtggag
tctcaggacagacactttacagtacgtttggagcgtaccttcaagacggcggaagatttt
aataatttggtactggccgaaggggaagatggttacctcatcaagctaggtgacgtggcc
agggtagagattggctcggaagaggagcgtattaccttccgtggtaaccgcgaggccatg
ataggccttgggatctccaagcaatcgacctccaacaccctggaagtggcccgcgccgcc
aacgccctggtggataagatcaatccgacactgcctgccggcatggagatcaaacgctcc
tacgacagctcagtgtttatcgaagcctctatcaaggaggtgtatcagacgctgtttatc
gccatgttcctggtgattgtggtgatttatctcttcctgggcagcgtgcgcgccatgttg
atcccggcgctgacggtaccagtctccctgatggcgacctttatcgtgctctacgccctg
ggttacaccattaacctgctgaccctgctggcgatgattctggctatcggtatggtggtg
gatgatgccatcgtggtgctggaaaacatccacagacgcatcgaggagggtgattcgccg
ctcaaggcggccttcctgggctctcgtgaggtggcctttgccgtggtggcgaccaccctg
gtgttggtggctgtgtttatgccgatcaccttccttgaaggagatctgggtaaactcttt
aaggagtttgcggtggccatgagcgccgcggtgatcttctcgagcttggtggccctgact
cttagccctatgatgtgctctaagctgctaaagcctgccgggcaagatccttggctggtg
cgcaagatagatgcgggcatgaactggctgtcggccggttaccgtgcgacgctcaagcgc
gccatggtccacccctttatcgtcagctcgctggtggttatcgccttagggcttagcggc
tatctgatgactaaggtgccgcaggagtttgcaccgcgggaggacagggggtcgatgttc
ctgatcgtcaacggtcctcagggggcaagcttcgagtatatcagtccctacatggatgaa
attgaaaatcgcctgatgccgctggtggatagcggtgaaattaagcgtctgcttattcgt
gcgccgcgcggctttggtcgcagcgccaacttctctaacggcatggcgatcatagtactg
gaagactgggcggaccgtcgcagtgcctttgagatcataggtgacattcgtgcccgtctg
tcggatctcgccggtgtgcgcgccttccccgtaatgcgtcaggccttcggccgcggcgtg
ggtaagccggtgcagtttgtgctgggaggcccaagttacgaagagctcgctaagtggcgc
gacatcttgttggagaaggccaaggagaatcctaacctggtcgggctggatcatgactat
caggagactaagcctcaacttagggtggtgatcgacaaagacagggcggcggaccttggg
gtctctatctcgcacataggtcgcacgctggagtctatgctgggctcgcgtctggtgacc
accttcatgcgcgacggcgaagagtatgacgtgatcatcgagggtaaccgtgataatcag
aataccgccagcgatctgagcaacatctatgtgcgctcggaccgcagtcgtgagctgatc
ccgctggcgaacctggtctcggtcgaggagtttgccgacgccagtcagctaaaccgctac
aaccgtatgcgcgccattaccatagaggccaacctggccgatggttatagcctgggtgag
gcgctggaatacctcaacaacctggcttacacctatctgccggccgaggcggtgatcagc
tacaagggtcagtctctggactatcaggagtctggcagctcgatgtatttcgtcttcctg
ctggccctgggtatcgtcttcttggtacttgcggctcagttcgaaagctatgttcaccct
atggtgatcatgctgaccgtacctctggccaccttgggggccctaatcggcctctggctg
acgggccagagcctgaacatctatagccagataggtatcatcatgctggtggggctggcg
gccaagaatggtatcttgatcgtcgaatttgccaaccagctgcgggataaagggatcgca
ttcgaaacagcgattatccaggcggcaagccagcgtcttcgtcctatcctgatgacaggg
atcaccaccgcggccggggctattccgctggtattggcccagggcgctggcgcagagacc
cgcttcgtgatcggcgtggtggtcctctcgggcatcatactggcgaccttcttcaccctg
ctggtgatccctgtggcctatggcctgatcgccagaaataccggttcgccggaggagatc
agtcagcgactggaggccgaacttgcacaagatcagcatcatgagtcaggcttaagaaat
gccgactag
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