Streptomyces harbinensis: HUT13_05265
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Entry
HUT13_05265 CDS
T07389
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
shar
Streptomyces harbinensis
Pathway
shar03030
DNA replication
shar03410
Base excision repair
shar03420
Nucleotide excision repair
shar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUT13_05265 (polA)
03410 Base excision repair
HUT13_05265 (polA)
03420 Nucleotide excision repair
HUT13_05265 (polA)
03440 Homologous recombination
HUT13_05265 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shar03032
]
HUT13_05265 (polA)
03400 DNA repair and recombination proteins [BR:
shar03400
]
HUT13_05265 (polA)
Enzymes [BR:
shar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUT13_05265 (polA)
DNA replication proteins [BR:
shar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HUT13_05265 (polA)
DNA repair and recombination proteins [BR:
shar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HUT13_05265 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUT13_05265 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QKV68248
UniProt:
A0A7H8GVF0
LinkDB
All DBs
Position
complement(1242451..1245159)
Genome browser
AA seq
902 aa
AA seq
DB search
MAENASHPQTTSAPRLLLLDGHSLAYRAFFALPAENFTTAVGQPTNAIYGFASMLANTLR
DEEPTHLAVAFDVSRKTWRSDRYDGYKATRSASPDEFKGQVELIGELLDTMRVRRFAVDG
FEADDVIATLATRAADEGFQVSIVTGDRDCFQLVSDRITVLYPTKGVSELTRFTPEKVEE
RYGLTPARYPDYAALRGDPSDNLPGIPGVGEKTAAKWIHQFGSLDALLERADEVKGKAGA
NLREHLESVRLNRELTELVRDMELECDPVDLVRSPYDREAMTVLLDVLEFRNPSLRERLF
AVDPGAAGEETVPAEGVAVDGTVLAAGELGPWLAGQDGQRLGVATLDDWKLGAGAVRAVA
LATGEGPAAWFDPAALDEADERAFAGWLADAGRPKVVHGAKGLMRVFAEHGWQLAGVAMD
TALAAYLVQPGRRSFALDALSVEFLGRELDRPEDDGGQLAFGADDEAEAQALMRQARAVL
DLGAAFEGRLADVGAAELLHDLELPVSALLARMERAGIAADRPHLERMEQRFAAAVQQAV
GEAHASVGHEFNLGSPKQLQEVLFGELGLPKTKKTKTGFTTDADALLWLAGQTEHELPVI
MLRHREQAKLRTTVEGLIKTIASDGRIHTTFQQTVAATGRLSSTDPNLQNIPVRTDEGRA
IRGGFVVGEGYETLLTADYSQIELRVMAHLSEDAGLIEAFTSGEDLHTTVASQVFAVGKD
DVDAEMRRKIKAMSYGLAYGLSAFGLSQQLSISPDEARKLMDTYFERFGGVRDYLQRVVD
EARATGYTETMLGRRRYLPDLTSSNRQRREMAERMALNAPIQGTAADIVKIAMLRVDEAL
TQKRLRSRMLLQVHDEIVLEVAPGEREAVEALVREQMPNAVSLRAPLDVSVGWGDTWESA
AH
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagaacgcatcgcacccccagacgacctcggcgccgcgtctgctcctgctggac
gggcactcgctggcgtaccgcgcgtttttcgcgctgcccgcggagaatttcacgacggct
gtcgggcagccgacgaacgcgatctacggcttcgcctccatgctggcgaatacgctgcgt
gatgaggagcccacgcatctggcggtggcgttcgacgtgtcgcgcaagacgtggcgctcc
gatcgctacgacgggtacaaggcgacccgttcggcgtcccccgacgagttcaaggggcag
gtggagctgatcggggagctgctggacaccatgcgggtgcggcgcttcgcggtggacggg
ttcgaggcggacgatgtgatcgccaccttggcgacgcgggcggccgacgagggcttccag
gtgtcgatcgtcaccggtgaccgggactgcttccagctggtgagcgaccggatcacggtg
ctgtatccgacgaagggtgtttccgagctgacccggttcacgccggagaaggtggaggag
cggtacggcctgaccccggcccggtatccggattacgcggccctgcgcggcgacccgtcg
gacaatctgcccggcattccgggggtgggggagaagacggccgccaagtggatccaccag
ttcggctcgctggacgcgctgctggagcgggcggacgaggtgaagggcaaggcgggcgcc
aatctgcgcgagcacctggagtcggtgcggctgaaccgggagctgaccgagctggtccgc
gacatggagctggagtgcgacccggtggacctggtgcgctccccgtacgaccgggaggcg
atgaccgtcctgctggacgtgctggagttccgcaacccgagcctgcgggagcggctgttc
gcggtggacccgggcgcggccggtgaggagacggtgccggccgagggcgtcgccgtcgac
ggcacggtgctggcggccggcgagctgggcccgtggctggccgggcaggacgggcagcgg
ctgggcgtggccaccctggacgactggaagctgggcgcgggcgcggtgcgcgcggtggcg
ctggcgaccggggagggcccggcggcctggttcgatccggcggcgctggacgaggcggac
gagcgggccttcgccggctggctggcggacgccggccgccccaaggtggtgcacggcgcc
aagggcctgatgcgggtgttcgccgagcacggctggcagctcgccggcgtcgccatggac
accgccctggccgcgtacctggtccagccgggccgccgctccttcgccctggacgcgctg
agcgtggagttcctgggccgcgagctggaccggccggaggacgacggcgggcagctggcg
ttcggcgccgacgacgaggccgaggcgcaggccctgatgcggcaggcccgggccgtcctc
gacctgggcgcggccttcgagggccggctggcggacgtcggcgccgcggagctgctgcac
gatctggagcttccggtgtccgcgctgctggcccgcatggagcgcgccgggatcgccgcc
gaccgcccgcacctggagcggatggagcagcggttcgccgccgccgtgcagcaggcggtg
ggcgaggcccacgcctcggtgggccacgagttcaacctcggctcgcccaagcagctccag
gaggtgctgttcggcgagctggggctgccgaagacgaagaagacgaagaccggcttcacc
accgacgcggacgccctgctgtggctggccgggcagaccgagcacgagctgccggtgatc
atgctgcggcaccgggagcaggccaagctgcgcaccacggtggaggggctgatcaagacg
atcgcctccgacggccgcatccacaccaccttccagcagaccgtcgccgccaccggccgg
ctctcctccaccgaccccaacctgcagaacatcccggtgcgcaccgacgagggccgcgcc
atccggggcgggttcgtggtcggcgagggctacgagacgctgctcacggccgactacagc
cagatcgagctgcgggtgatggcccacctgtcggaggacgccgggctgatcgaggcgttc
acctccggcgaggacctgcacaccacggtcgcctcgcaggtcttcgccgtcggcaaggac
gacgtggacgccgagatgcgccgcaagatcaaggcgatgagctacggcctggcgtacggc
ctgtcggcgttcggtctctcgcagcagctgtcgatcagcccggacgaggcacgcaagctg
atggacacctacttcgagcgcttcggcggggtccgtgactacctccagcgggtggtcgac
gaggcgcgcgccaccgggtacaccgagacgatgctcggccgccgccgctatctgccggac
ctcaccagctcgaaccggcagcgccgggagatggccgagcggatggcgctgaacgccccg
atccagggcacggctgcggacatcgtgaagatcgcgatgctgcgggtggacgaggccctg
acgcagaagcggctgcgttcgcggatgctgctccaggtccacgacgaaatcgtgctggag
gtcgccccgggcgagcgcgaggcggtggaggcgctggtgcgtgaacagatgccgaacgcc
gtctcgctgcgtgccccgctggatgtgtccgtcggctggggcgacacctgggagtcggcc
gcgcactag
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