Streptomyces harbinensis: HUT13_08220
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Entry
HUT13_08220 CDS
T07389
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
shar
Streptomyces harbinensis
Pathway
shar03030
DNA replication
shar03430
Mismatch repair
shar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUT13_08220 (holA)
03430 Mismatch repair
HUT13_08220 (holA)
03440 Homologous recombination
HUT13_08220 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shar03032
]
HUT13_08220 (holA)
03400 DNA repair and recombination proteins [BR:
shar03400
]
HUT13_08220 (holA)
Enzymes [BR:
shar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUT13_08220 (holA)
DNA replication proteins [BR:
shar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUT13_08220 (holA)
DNA repair and recombination proteins [BR:
shar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUT13_08220 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HAD
DNA_pol3_gamma3
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QKV68775
UniProt:
A0A1I6UMP2
LinkDB
All DBs
Position
complement(1876812..1877801)
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AA seq
329 aa
AA seq
DB search
MARKTQNTADDPLAALTVAVGQEELLLDRAVREVTDAARAADPDTDVRDLAAGELQPGTL
AELTSPSLFAERKVIVVRAAQDLGADTVKELKSYLAAPAEEITLVLLHAGGPKGKGLLDA
ARKAGAREVACPKMTKPADRLTFVRGEFRSLGRSASPGACQALVDAIGSDLRELASAVAQ
LTADVEGAIDESVVARYYTGRAEASSFTVADRAVEGRPAEALEALRWALATGVAPVLVTS
ALAQGVRAIGKLASAPGGMRPGDLARELGMPPWKIDRVRQQMRGWSADGVAVALRAVADA
DAAVKGGGYDPAYALEKAVVTIARAARSR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaagacgcagaacaccgccgatgacccgctcgccgccctcaccgtcgcggtg
gggcaggaggagctgctgctggaccgcgccgtgcgggaggtcaccgacgcggcccgggcc
gccgacccggacaccgatgtacgggacctggcggccggggagttgcagccgggcacgttg
gccgagctgaccagcccctcgctgttcgccgagcgcaaggtcatcgtggtcagggcggcc
caggacctcggtgcggacaccgtcaaggagctgaagtcctatctggcggcgcccgccgag
gagatcaccctcgtgctgctgcacgccggtggccccaagggcaaggggttgctggacgcc
gcccgcaaggcgggggcgcgcgaggtggcctgtccgaagatgaccaagccggccgaccgg
ctcaccttcgtgcgcggggagttccggtcgctggggcgcagcgcaagccccggggcctgc
caggccctggtggacgccatcggcagcgatctgcgggagctggcctccgccgtggcccag
ctgaccgccgatgtggagggcgccatcgacgagtcggtggtggcgcggtactacaccggc
cgtgccgaggcgtccagcttcaccgtcgccgaccgggcggtggagggaaggccggccgag
gcgctggaagcgctgcgctgggcgctggccaccggggtggccccggtgctggtgaccagc
gcgctggcccagggtgtgcgggcgatcggcaagctggcctcggcccccggcggcatgcgg
cccggcgatctggcgcgcgagctgggcatgccgccgtggaagatcgaccgggtgcggcag
cagatgcgcggctggtcggcggacggggtggcggtcgcgctgcgcgcggtggcggacgcg
gacgccgccgtcaagggcggcggctacgacccggcgtacgcgctggagaaggcggtggtc
accatcgcccgcgccgcccgttcccggtga
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