Shewanella sp. MR-4: Shewmr4_1635
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Entry
Shewmr4_1635 CDS
T00388
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
she
Shewanella sp. MR-4
Pathway
she00020
Citrate cycle (TCA cycle)
she00785
Lipoic acid metabolism
she01100
Metabolic pathways
she01110
Biosynthesis of secondary metabolites
she01120
Microbial metabolism in diverse environments
she01200
Carbon metabolism
she01210
2-Oxocarboxylic acid metabolism
Module
she_M00009
Citrate cycle (TCA cycle, Krebs cycle)
she_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Shewmr4_1635
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Shewmr4_1635
Enzymes [BR:
she01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Shewmr4_1635
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
PmbA_TldD_1st
Motif
Other DBs
NCBI-ProteinID:
ABI38711
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All DBs
Position
1936356..1939175
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AA seq
939 aa
AA seq
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MHQGIMKAWLESSHLSGANSTYVEEMYEAYQEDPQSVSDDWRAVFDNLPPVNGASKDAPE
AAHSKVRDYFRSLAMDGRHKSAARVTDPELDAKQVKVLQLINAHRFRGHQGANLDPLELW
KREPVADLDPAFHGLTKEDMEREFNTGSFAHGGETMKLADLVKALKATYCGSIGAEYMHI
TDTDEKRWIQQRLEPSLGKANYDKSVKTRILEGLNAAEGIEKYLGAKFPGAKRFSLEGGD
ALVPMMREIIYRAGEAGTKEIVVGMAHRGRLNVLVNVLGKRPAELFDEFAGKHADTHGSG
DVKYHQGFSSDFETPGGNVHLALAFNPSHLEIVNPVVMGSVRARQDRRGCKDGLQVMPIT
IHGDSAIAGQGIVQETFNMSQTRGFKVGGSIRIVVNNQVGFTTSNHFDVRSTEYCTDIAK
MVQAPIFHVNSDDPEAVAFVAQLAVDYRNEFKRDVVIDLVCYRRHGHNEADEPSATQPLM
YAKIKKHPTPRKIYADKLIAENAIGADEVTSMINTYRDALDQGDCVVKEWRPMTLHTVDW
SPYIGREWDEAYQASMPLARLQNLADKLSYVPESHPLHSRVAKIYGDRVAMAKGEKLLDW
GFAETLAYATILEDKQRVRITGQDSGRGTFFHRHAVLHNQNDATTYLPLRNLSEDQGPID
ITDSVLSEASVLAFEYGYATAEPGGLAIWEAQFGDFANCAQVVIDQFLSSGEQKWGRLCG
LTMLLPHGYEGQGPEHSSARLERFLQMCANHNMQVCVPSTPAQVYHMLRRQVVRPMRRPL
VVMSPKSLLRHPLAVSSMEELANGTFQNVIGEIDTLEASKVDRVVFCSGKVYFELLEKRR
KENINNIAIIRVEQLYPFPHEEMVAALADYQHVKDFVWCQEEPQNQGAWYSSQHHFWAAI
PAGAKLTYAGREASAAPACGYPELHAHQQESLVNSALKL
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaggcatcatgaaagcctggctcgaatcatctcacttaagtggtgcaaattcg
acctacgtagaagagatgtatgaagcctatcaagaagacccacagtcagtctctgacgat
tggcgtgcggtatttgataatctccctccggtgaacggtgcttctaaagacgcgcctgaa
gcggctcactccaaagtacgtgattattttcgcagtttagcgatggacggacgtcataag
agcgcagctcgtgtgaccgatcctgagttggatgctaagcaagttaaagtgctacagctg
atcaacgcccaccgtttccgtggtcaccaaggggctaacctcgacccgttagaattgtgg
aaacgtgaacctgttgccgatttagatcccgcattccacggtctgaccaaagaagacatg
gaacgtgagttcaacactggctcgttcgcccacggcggcgaaaccatgaagctggctgac
ttagtcaaagcgctaaaagccacttactgtggttcgattggcgccgaatacatgcacatt
accgataccgatgagaagcgttggatccaacaacgtctcgaaccatccttaggtaaagcc
aactacgataaaagcgttaagacccgcattctcgaaggcctaaatgctgctgaaggcatt
gaaaaatatttaggcgctaaattcccaggtgcaaaacgcttctcgttagaaggcggcgat
gcgttagtccctatgatgcgcgaaatcatttatcgcgcaggcgaagcgggcactaaagaa
atcgtagtcggtatggctcaccgtggtcgtttaaacgtactggttaacgtgttaggtaag
cgtccagcagaactgtttgacgagttcgccggtaagcacgccgatacccacggttcaggc
gacgtaaaataccaccaaggtttctcttcagatttcgaaacgccgggcggcaacgtgcac
ttagcactggcctttaacccatcacaccttgaaatcgttaaccctgtggttatgggctct
gtccgtgctcgtcaagaccgccgtggttgtaaagacggtttacaggtgatgccaattacg
attcacggtgactctgcaattgctggtcaaggtatcgtgcaagagacattcaacatgtct
caaacccgtggctttaaagtgggcggcagcatccgtattgttgtgaacaaccaagttggt
tttacaacgtcaaaccactttgatgtgcgttcaactgaatactgtactgacatcgctaag
atggttcaggcaccgattttccacgtgaactctgacgatccagaagccgttgcctttgtt
gctcagcttgctgttgattatcgtaacgagtttaaacgtgacgtggtgattgatttagtg
tgttaccgccgtcatggccacaacgaagctgatgagccaagtgcaactcagccactgatg
tatgccaagatcaagaaacaccctacgccacgtaagatctatgctgacaaactgatcgcc
gaaaacgctatcggcgctgatgaagtgaccagcatgatcaacacttaccgcgacgcctta
gatcaaggcgactgcgtagtgaaagaatggcgcccaatgacactgcacacagtggattgg
agtccgtatattggccgtgagtgggacgaagcgtatcaagcctctatgccactggcgcgc
ttacagaatctagctgacaaactgagctacgtaccagagagccacccgctgcattcacgc
gttgctaaaatttatggcgatcgcgttgccatggcaaagggcgagaagctactcgactgg
ggctttgctgaaactttagcttacgccacgattcttgaagataagcaacgtgttcgcatt
acaggtcaagactctggccgtggtactttcttccaccgtcacgcggttctgcacaaccaa
aacgatgcgacaacatacttaccactgcgtaacttgtctgaagaccaaggtccaatcgac
attactgactcagtattgtctgaagcatcagtactcgccttcgaatacggttatgcgacg
gcggaacctggtggtctggcgatttgggaagcccaattcggtgactttgctaactgtgcg
caagtggttatcgaccagttcttgtcttctggtgagcaaaagtggggccgtctgtgcggt
ctgactatgctgttaccacacggttacgaaggtcaaggtccagaacactcaagcgcccgt
ttagagcgtttcttgcagatgtgtgctaaccacaacatgcaagtttgtgtgccatcaacg
ccagcacaggtttaccatatgctgcgtcgccaagtggttcgcccaatgcgtcgtccactg
gtagtgatgtcacctaaatcattgctacgtcacccgctagcggtttctagcatggaagaa
ttggctaatggcaccttccaaaacgtgattggtgaaatcgatacgttagaagcgagcaag
gtcgatcgcgtcgtgttctgtagcggtaaggtatacttcgagctgctggaaaaacgccgt
aaagaaaacatcaataacatcgcaataatccgtgtcgaacagttatatccgttcccacat
gaagaaatggtagcagccttagctgactatcaacatgtgaaggattttgtatggtgtcag
gaagagccgcaaaaccagggtgcttggtactctagccaacatcacttctgggcagctatc
cctgcgggagcaaaactgacctacgctggtcgtgaagcatctgctgcaccagcctgtggt
tacccagagctgcatgctcaccaacaagaatctttagtgaacagtgccctaaagctgtaa
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