Shewanella sp. MR-4: Shewmr4_1701
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Entry
Shewmr4_1701 CDS
T00388
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
she
Shewanella sp. MR-4
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
HTH_8
AAA_2
AAA_22
AAA_16
AAA_7
MCM
AAA_19
AAA_30
ATPase
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABI38776
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Position
2011679..2013223
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AA seq
514 aa
AA seq
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MTCLLLLLINLNIGLGMNIINEKVLVSWIGGNDLESKASKMTGPIWATVSDVTFDRLELI
YNYPSDLVTPYLELLTGNLSCPVNARKADLSSPINFGEIYLAAERLLDVISCETIALSIL
LSPGTPAMQAVWILLGKTRFACNFYQASKEQGVNIVEIPFKLTAEYIPSMTNLAPTEFGQ
LGLLDSDADPAFDDIITLDPEMLLLKAKAQVLASHEVSVLICGESGTGKEMFARAIHNAS
ARRDKPFVAVNCGAFPSELIDSILFGHKKGAFTGAVSDKVGVFELAHSGTLFLDEFGELD
SSAQVRLLRVLQDGKFTRLGDSKERSSNFRLITATNRDLMADVSKGRFREDLFYRVAIGV
LSLPPLRSRQSDLDHLADQFTAMLTQEYPSLGGKKISTAAKKIISNHRWPGNIRELKATI
LRAALWSETAVLEDVDILRAILSTLQNSESILERDISKGVDIKSIIDLVERHYLERGLAF
TSGNKRKTALLLGYNNHQTLNNRLKKLGLENDND
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgacatgtttgcttttactattgataaatttaaatattggtttagggatgaacataatt
aacgaaaaagtgttggttagttggattggtggcaacgatttagaatcaaaggcgagtaaa
atgactggccctatatgggcgacagtatctgatgttacctttgataggcttgagcttatt
tacaattatccgtcggatctagttactccataccttgaactactcactggcaatctgagt
tgtccagtcaacgcacgtaaggccgatttatcctcgccaattaattttggagaaatttac
ctcgctgcagaacggctactggacgttattagttgtgaaaccattgcactgtctatttta
ttgagtccaggtacacctgctatgcaggctgtatggatattactcggtaaaactcgattc
gcctgcaacttttatcaagcatcaaaagaacaaggcgttaatattgtagaaattcctttt
aagctcactgctgaatatattccttcgatgactaatctagcccctactgaatttgggcaa
cttggtctattggactctgatgctgatcctgcctttgatgacattattacccttgatcct
gaaatgttactacttaaagccaaggcacaagttttagcatcgcatgaagtatctgtgctg
atttgtggtgagagtggtaccggcaaagagatgtttgctcgggcaattcataatgcaagt
gcgagaagggataaaccatttgttgcggtcaattgtggcgcatttccctcagaacttatt
gattcaatactttttggtcataaaaagggggcttttactggtgcggtttcagataaggta
ggagtttttgaattggcacattcaggtactctttttttggatgagtttggcgagcttgat
agttcagcccaagtcaggctacttagagtattacaagatggtaaattcactcgcttggga
gatagtaaagaacgtagcagcaattttcgtttgatcacagcaactaatcgagacttgatg
gctgacgtttccaagggtaggttcagggaggatttattctatagggttgccattggtgtg
ttgtccttaccacctctaaggtctcgacaaagcgatttagaccatctagcagatcagttt
accgccatgctcacacaagaatacccttcactaggtggtaaaaaaatttccactgctgca
aaaaaaattatcagtaatcatcgttggcctggaaatatcagagagctgaaagcaacgatt
cttagggcagccttatggtctgaaactgccgtattggaagacgttgatatactcagggcg
atactttcgacgctccaaaatagtgagagcattctcgaaagagatatatcaaaaggtgtt
gatataaaaagtattattgatctagtagagcggcactatttagaacgaggattggcattt
acgtcagggaataaacgtaaaacggcgttgttactcggctacaacaatcaccaaacttta
aataatcgccttaaaaaactcggcctagaaaacgacaatgactaa
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