Shewanella sp. MR-4: Shewmr4_2344
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Entry
Shewmr4_2344 CDS
T00388
Name
(GenBank) transcriptional regulator, LysR family
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
she03000
]
Shewmr4_2344
03036 Chromosome and associated proteins [BR:
she03036
]
Shewmr4_2344
Transcription factors [BR:
she03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Shewmr4_2344
Chromosome and associated proteins [BR:
she03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Shewmr4_2344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
P22_Cro
HTH_30
HTH_AsnC-type
MarR_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ABI39415
LinkDB
All DBs
Position
2794021..2794938
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AA seq
305 aa
AA seq
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MLEYANLKALAVVVSEGGFERAAKVLHITQSAVSQRVRQLEERVGQSLLIRSTPVVATPT
GKRLLRHYSQVQLLESELRAELDADDPNHPTTVRIAVNADSLATWFLPALADMFSRHAWL
LELIVDDESYTHHLLKNGEAVGCVTTTANPMAGCSSEFLGTMEYMCVATPAFAARYFEWA
KNSDDLGAQITQAQLAKAPAVVFSTKDKMHEKYLAQYFQMLPGQWWQHSIPSSESFLEAI
NLSLGYGLVGHLQAKPLIDKGILIELTPEKRIRVPLYWQHWNIKAKQTTLVYRALAATAQ
HLLQQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgttggaatacgccaatcttaaagcgcttgcggtcgtcgtctccgaaggcggcttcgag
cgcgccgccaaagtgttgcatatcactcaatcggcagtgtcacagcgcgttagacaatta
gaagaacgagtcggccaatccttacttattcgctcgacgcccgtggtggcgactcccacg
ggtaaacgtttattgcgccactattctcaggtgcaattactcgagagtgaattgagagcc
gagttagatgccgatgacccaaaccatcccacgacggtgcggattgccgtcaatgccgac
agtttagcgacatggtttttacccgccttggccgatatgttcagccgacatgcctggctg
ctggaattgattgtcgatgatgagtcctacacccatcacctattgaaaaatggtgaggcc
gtcggttgtgtgactacaacggccaaccccatggccggttgtagcagcgagtttttaggg
accatggaatatatgtgtgtcgcgaccccagcatttgcggcgcgttatttcgaatgggca
aaaaatagcgatgatctcggcgctcaaattacccaagcgcagctcgcgaaagcccctgcc
gtggtgttttcaaccaaagataaaatgcatgaaaagtacctcgcccagtattttcaaatg
ttgccaggccaatggtggcaacacagcattccctcatcggagagttttttagaggcgatt
aacttaagtctaggttatggtttagtcgggcacttacaggcaaaacctttgatagacaaa
ggcatattgattgaactcaccccagaaaaacgcattcgggtgcccctctattggcagcat
tggaatataaaagccaagcaaacgaccttggtctatcgcgccctcgctgccaccgcgcag
catctattacagcaatga
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