Shewanella sp. MR-4: Shewmr4_2872
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Entry
Shewmr4_2872 CDS
T00388
Name
(GenBank) glutamate synthase (NADPH) large subunit
KO
K00265
glutamate synthase (NADPH) large chain [EC:
1.4.1.13
]
Organism
she
Shewanella sp. MR-4
Pathway
she00250
Alanine, aspartate and glutamate metabolism
she00910
Nitrogen metabolism
she01100
Metabolic pathways
she01110
Biosynthesis of secondary metabolites
she01120
Microbial metabolism in diverse environments
she01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Shewmr4_2872
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Shewmr4_2872
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
she01002
]
Shewmr4_2872
Enzymes [BR:
she01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.13 glutamate synthase (NADPH)
Shewmr4_2872
Peptidases and inhibitors [BR:
she01002
]
Cysteine peptidases
Family C44
Shewmr4_2872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATase_2
Glu_synthase
Glu_syn_central
GXGXG
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
ABI39943
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All DBs
Position
3424144..3428592
Genome browser
AA seq
1482 aa
AA seq
DB search
MSLYHPSFERDNCGFGLIAQMDGEASHRIVRTAIHGLDRMKHRGGIASDGRTGDGCGLLM
QLPLQFFEAIAAENDWHLSRKFAVGMLFLSQDEELADQAKFILERELERETLSIAGWRKV
PVNPEVLGEIGKSSLPQIYQVLINAPIGWREKDLERRLYMARRRLEQQITDDKDFYVASL
SGQVIVYKGLMMPADLPAFYPDLADIRLKSSICLFHQRFSTNTSPKWPLAQPFRYLAHNG
EINTITGNRQWARARAYKFNSPLLPDLQQAAPFVNETGSDSSSLDNMLEMLLSGGMDLYR
AMRLLIPPAWQSNPEMDDELKAFYDFNSMHMEPWDGPAGIVMTNGRHAACAVDRNGLRPS
RYVITKDRILTLASEVGIWDYAADEVIEKGRVGPGELLVLDTLNGRLYQSFEIDNDLKRR
HPYKEWMAKNSRTLIPAEQLATEQHGASELSAEQLLQYQKQFGYTREELEQVIWVLAKQG
EEATGSMGDDTPMAVLSKKSRSLYDYFRQKFAQVTNPPIDPLREKHVMSLATCIGREQNL
FNETTGHAYRVMFNSPILLFSDFNQLLGLDSTYYRANIVDLNYDPKEGLEHAIRRITSEA
ERLARSGTTLLILSDRAIDKSAQVIPAAMAVGAVQQMLVSKSLRCDTNIIVETASARDPH
HFAVLLGFGATAIYPYLVYESISDLAKRHQLTDTTALMLNFRYGIEKGLRKIMSKMGIST
VGSYRCSQQFEAIGIASDVIELCFKGVVSRIEGASFEDIAQDQALLHKAAYRAHVPLPQG
GLLKYVDGGEYHCFNPDVVNTLQASLIDKNFATYKKFAELVDNRPVATLRDLIGIKADQA
AIELDKVEAASHLFPRFDSAAMSIGALSPEAHEALAIAMNRLGGRSNSGEGGEDARRFNT
ERNSAIKQIASARFGVTAHYLVNADVLQIKVAQGAKPGEGGQLPGHKVSVEIAGLRHARP
GVTLISPPPHHDIYSIEDLAQLIFDLKQINTKALISVKLVSEPGVGTIATGVAKAYADMI
TISGYDGGTGASPITSVKYAGSPWELGLAEVHQSLVENGLRHKIRLQVDGGLKTGTDVIK
AALLGAESFGFGTVPMIALGCKYLRICHLNNCATGVATQDKKLRDNHYHGLPERVMTYFE
FVAEEVREWMATLGVSKFEDLVGRSEWLHTLEGQTDKQRGLDLAPILYQPKVRASTSRTW
QETNPPADLGLLNQHLLNECQNAVDKGECFDAAYSINNTDRSVGARLSGYIASTLGVKGT
KAPIKLSFNGSAGQSFGVWNSPGLELKLCGDANDYVGKGMSGGKIVIYPPLGSPFQSERS
AIVGNTCLYGATGGRFFAAGQAGERFAVRNSGAIAVVEGLGDNGCEYMTSGIVVVLGKTG
VNFGAGMTGGFAYVFDQFGRFNRRVNNELVDTQKLESPIHQQHLKGLIEEHVAETGSEHA
KMILSDFANWLDCFVLVKPKNIAVADLLKLEQSSPELAVKAG
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgagcttatatcatcccagttttgagcgggacaattgtggttttggcttgattgcacaa
atggatggcgaagccagccatcgtatcgtgcgcaccgccatccatggcctcgatcgcatg
aaacaccgtggcggtatcgcctctgacggtcgaactggggacggctgtggtttattaatg
cagctaccattgcaattctttgaagccattgccgcggaaaatgactggcacctgagccgt
aaattcgccgttggcatgttgtttttaagccaagatgaagaactggccgaccaagccaag
tttattctcgaacgcgaactcgagcgtgaaaccttaagcattgccggttggcgtaaagtc
cccgtcaatccagaggtattgggtgagattggtaaatcgagcctgccgcaaatctatcaa
gtcctgatcaacgccccaattggctggcgtgagaaagatcttgagcgtcgcctctacatg
gctcgccgccgtttagagcaacaaattactgacgataaagacttttatgtcgcgagtctt
tcaggccaagtcatagtctacaaaggcttgatgatgcctgccgacttgcccgcattctat
cctgaccttgccgacatccggttgaagagctctatttgtttattccatcaacgcttttca
accaatacttcacctaaatggccactcgctcagccctttagatatcttgcccataacggc
gagatcaacactattaccggtaaccgccaatgggcccgtgcacgtgcctacaaatttaat
tcgccgctgctgcccgatttacaacaggcggcaccctttgtgaatgaaacgggctcagat
tcatcctccctcgacaatatgctcgagatgctgctctcaggcggtatggacctataccgc
gccatgcgtttgcttattccgccagcgtggcaaagtaacccagagatggatgacgagcta
aaagccttttatgactttaactccatgcatatggaaccctgggacggcccagcgggtatc
gtcatgaccaacggtcgccacgccgcttgcgcagtggatcgtaacggtcttcgtccatca
cgttatgtgatcaccaaagatcgtatcctcaccctcgcctccgaagtgggcatttgggac
tacgccgccgatgaagtgattgaaaaaggccgcgtcggcccgggtgaactgttagtgtta
gatactctcaatggtcgtctgtaccagtcattcgaaatcgataacgatcttaagcgtcgc
cacccctataaagagtggatggcgaaaaacagccgtactctaatcccagcagagcagttg
gcaacggagcaacatggcgccagcgaattaagcgctgagcaactgctgcaataccaaaag
caatttggttacacccgcgaagagcttgaacaagtaatttgggtgctggcaaaacaaggc
gaagaagcgacaggttccatgggcgacgatacaccaatggccgtattgtcgaaaaagtca
cgctcgctctatgactatttccgacagaaattcgctcaagtcactaacccgcctatcgat
ccgctgcgtgaaaagcacgtgatgtctctggcgacctgtatcggccgcgagcaaaacctc
ttcaacgaaaccactggccatgcttatcgagtgatgttcaactcaccgatattattattc
agtgatttcaatcaattactcggattagatagcacttactatcgcgccaatatcgtcgat
ttaaattacgatccgaaggaaggcttagaacacgctatccgccgcatcacctcggaagcc
gaacgtttagctcgcagtggcaccacgctgctgattttatccgaccgcgcgattgataaa
tcggcgcaggtgatcccggcggccatggcggttggcgctgtacaacaaatgctggtgagc
aagagcctgcgctgcgataccaacatcattgttgagaccgcatcggcgcgggatccgcac
cactttgcggtgctgctcggttttggtgccacggcgatttatccgtatctagtgtatgaa
tcaatctcagatctggcgaaacgccatcaactgaccgataccacggcgctgatgctgaac
ttccgctacggcatagagaaaggcctgcgtaagatcatgtcgaagatggggatcagcacc
gtcggctcctaccgttgtagccaacagtttgaggccattggtattgccagcgatgtaatt
gaactctgctttaaaggggtagtgagccgcatcgaaggcgccagctttgaggatatcgct
caagatcaagcgctgctgcataaggccgcttaccgcgcccatgtgccgctgccacaaggc
ggtttactcaaatacgttgatggcggtgagtaccactgcttcaacccagatgtggtcaac
acgctgcaagcatccttaatcgacaagaattttgcgacctataagaagttcgccgaatta
gtcgataaccgcccagtcgccaccctaagggatttgattggcattaaggctgaccaagcc
gcgattgaactggataaggtcgaggctgccagccacttattcccacgctttgacagcgcg
gccatgagtatcggcgccctaagccccgaggcccatgaggcattagccatcgccatgaac
cgtttaggtggccgctctaactcgggcgaaggtggtgaagatgctcgccgttttaatacc
gaacgtaactcggcgattaaacaaattgcgtcggcacgttttggcgtaaccgcccattac
ctagtcaatgccgatgtgctgcagattaaagttgcacagggcgcaaaacccggtgaaggc
ggacaactgccaggccataaggtgagtgtggaaattgcagggctgcgccacgcgcgccca
ggtgtaaccttgatttcaccaccaccacaccatgatatttactctatcgaagacttagca
cagctgattttcgacttaaaacaaatcaataccaaggcactgatctccgtgaagttagtg
tctgagcctggtgtcggcactatcgccacgggtgtggcaaaagcctacgccgatatgatc
actatttctggctacgatggcggcacgggcgcaagccctatcacctcggtgaaatacgcc
ggcagcccatgggaactcggccttgccgaagtgcatcaatctctggtggaaaatggtctg
cgccataagatccgcttgcaggtcgatggcggcctaaaaaccggtaccgatgttatcaag
gcggccttactcggcgccgagagcttcggattcgggactgtgcccatgattgccttaggt
tgtaagtacctgcgtatttgccacctgaacaactgcgcaaccggtgtcgcgactcaggac
aagaaactgcgcgataaccactaccacggcttaccagagcgagtgatgacttactttgag
tttgtcgccgaggaagtgcgcgaatggatggcaacgctaggggtcagcaagttcgaagac
ttagtcggccgcagtgagtggctacataccttggaaggccagaccgataagcaacgtgga
ctcgatttagcgccgatcctgtatcagccaaaggtcagagccagcacctcgcgcacttgg
caggaaaccaatccaccagcggatttaggcttactcaaccaacatctgctcaacgagtgc
cagaatgcggtcgataagggcgagtgtttcgatgccgcatacagtatcaacaatactgac
cgctcagtgggcgcacgcctatcgggctatatcgccagcacccttggcgttaaaggcact
aaggccccgattaaactcagctttaatggcagtgccggccaaagctttggggtatggaac
agcccaggtcttgaactcaagctctgcggtgatgccaacgactacgtcggtaaaggcatg
tcgggcggcaagattgtgatttatccaccgctagggagcccgttccagagcgagcgcagc
gcgattgtcggtaacacttgtctgtatggcgcgactggcggacgcttcttcgcagcgggt
caagcgggtgaacgcttcgcggtacgtaactcgggcgccatcgccgtagttgaaggctta
ggcgataacggctgcgaatacatgaccagcggtatcgttgttgtgctcggcaaaaccggg
gttaacttcggcgcagggatgacgggcggttttgcctatgtcttcgaccaatttggccgc
tttaaccgccgcgtgaataacgagcttgtcgatacccaaaaactcgagtctcctatccat
caacagcatttgaaaggcttgattgaagagcatgtggccgagaccggcagtgagcacgcg
aagatgatcttaagcgactttgccaactggttagattgctttgttttagtgaaaccgaaa
aatatcgccgttgcagatctgctcaaattagagcaatcgagcccggaactagcagttaaa
gcggggtaa
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integrated database retrieval system
