Shewanella sp. MR-4: Shewmr4_3416
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Entry
Shewmr4_3416 CDS
T00388
Name
(GenBank) conserved hypothetical protein
Organism
she
Shewanella sp. MR-4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
Viral_helicase1
ResIII
MTES_1575
Helicase_RecD
AAA
AAA_16
AAA_22
nSTAND3
DEAD
PhoH
SLFN-g3_helicase
AAA_10
Motif
Other DBs
NCBI-ProteinID:
ABI40482
LinkDB
All DBs
Position
4080866..4083583
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AA seq
905 aa
AA seq
DB search
MQGILNYYKQCFQHDSAEINLWASHKLAEQDQLLLQHEDELSSGFLPRLPVPFAPASALM
ARSALYLREKVLLHCCLFFCGSVELNGEKRKVVTPLLYRECQLQLDGDNIYLECNHTLTG
SGQFTINEPLLEKLVVEGHSLSQELRDNPTDVSGWIAWLRAGQADVDTGHLLHFPKLIDE
AEFTRLSRKRGPFLVSRSQVILAERSFASRGILHELDKLITAPSLSAPLQALFGHAPSQD
SESIHVDTQEDYLPGLLSRAQIQALKVAANHTLGQISGPPGTGKSYTIATVAAEQVLRGM
SVLVVAHTDVAVDVIADKLQQQFQLGSSLIRAGSPQFIKVLKNQIDEMLHGQHPAVDQEV
TDIVLRLAKQQLANVTRKQANMETGFIRHCRHAIRRGQKLATLEQKQSRWRLGFYQWFNR
SGIKQFAQQWDVLDRLTALIEQKESLSLKYLQLATGYRLNQLLKHKRSTLVSFASALRAR
QSAKQLEGFYKTDFDALKQTFPIWLSSLASLHRVLPMQVQMFDLVIIDEATQANIAACLP
ALQRAKAALVVGDSKQLRHFSFLSRAKQTQIQTQLGLAADCRGLMSYRDASMLDLVSQSL
ERQSQVVFLNEHFRSKPELIQFSNQQFYQGMLKVMQHRPCTSSGHLHRVHVTGSRDSKGI
NAIEAEALIQKLSQLIDEQENALVPASIGVLSCFRNQTEYLSQQILARFSAQQIERHQLR
IATPFGFQGEERDIMLLSFSITPKDSRAAVYLNRADMFNVAITRAKQMQWLFLSVQEHEL
PSNNLLATYLASAGQFQAAHHYVDSLDSFGQSVAHAIEEKGISVWRAYHIAGLELDILCR
YGNQYLAIDLIGYPGPWADFFDIDMYKLLQRAGIKLIPVSYGLWCQQRELCIQHICQQLG
IPQPR
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagggattcttaactactacaaacagtgttttcaacacgacagtgctgaaattaac
ctctgggctagccataagctggcggaacaagatcaactcttgctccagcatgaagacgaa
ttgagtagtggttttctaccgcgcctgccagtgccatttgctcccgcatcagcgttaatg
gcacgtagtgccttgtatctacgtgaaaaagtactattgcattgctgcctgtttttttgc
ggtagtgttgagcttaatggagaaaaacgtaaagtcgtcacgccactgctgtaccgagaa
tgccaattacagcttgatggcgataacatttacctagaatgcaatcacactctgacaggc
tctgggcaattcaccatcaatgagcccctgttagaaaagttagtcgttgagggccatagt
ttaagccaagagttacgcgacaatccaacggatgttagtggttggatagcttggctgcgg
gcgggtcaggccgatgtcgacacgggtcatttattacatttccccaaactgatcgatgaa
gcggaatttacccggctcagccgtaaacgcgggccgtttttggtcagccgtagccaagtg
attctggcagaacgttcctttgccagtcgcggcattttgcacgaactcgataaactcatc
acggcgccctcactctcagcaccgctgcaagcactgtttgggcatgctccaagccaagat
tcagaaagtattcatgtcgatacccaagaggattacctgccagggctattaagccgcgcg
caaattcaggccctaaaggtagcggctaatcatacattggggcaaatatcgggcccacca
ggcacgggtaagagttacaccatagccacagtggcagcggaacaagtattaaggggcatg
tcagtactggtagtcgcccacacggatgttgcggtggatgtgatcgccgacaaattacag
caacagttccagcttgggagcagccttatccgagccggctcaccgcagtttattaaagtc
cttaagaaccaaatcgatgagatgcttcatggtcagcaccccgcggttgaccaagaggtg
acggatattgtgttacgccttgcaaaacaacagttagccaatgtcacccgtaagcaggcc
aatatggaaacgggttttatacgccactgccgacacgcaatacgtcggggccagaaactc
gcgacactagagcaaaagcaatcccgctggcgcctaggattttatcagtggtttaatcgc
tcaggcatcaagcagtttgcccagcaatgggatgtactcgacagattaaccgcccttatc
gagcaaaaagaaagcttaagcctcaaatacttacaattggctactggttatcgattaaat
caattactcaaacataagcgcagtacgctggtgagttttgccagtgcgctacgggcacgg
cagtcagcgaagcaactcgaaggcttctacaagacagattttgatgctttaaaacagacc
tttcctatttggttatctagccttgcgagcttacatagggtactgcccatgcaggtgcaa
atgtttgatttggtcattattgatgaggcgactcaagccaatattgccgcatgtctaccg
gccttgcagcgcgccaaagctgcgctcgttgttggcgatagtaaacagctacgccatttc
tcgtttttatcccgcgcaaaacaaacccaaatccagacccagctcggactcgcagcagat
tgccgcggattaatgagctaccgtgatgccagtatgctcgacttagtatcgcaatccctt
gaacgccaatcccaagtggtatttttaaatgagcattttcggagtaaacctgagctaatc
caatttagtaatcagcagttttatcaaggcatgttgaaggttatgcaacacaggccctgt
acgagttcggggcacttacacagagtccatgtgactggcagccgtgatagcaagggaatt
aacgccatagaagccgaggcattaattcaaaaactgtctcaactgattgatgaacaagag
aatgcattagttccagccagcattggggtactctcctgctttcgcaatcagacagagtat
ttatcccagcaaattctcgcgcgctttagtgcgcagcagatagagcgccaccaattacgg
attgcgacgcccttcggatttcaaggggaggagcgcgatattatgctgctgtcgtttagc
attacgcccaaagacagccgagcggcagtgtatttaaatcgcgccgatatgtttaatgtc
gcgattacccgcgccaagcagatgcagtggctattcttatccgtgcaagagcatgagctt
cctagcaataatttactggcaacttacttagcatcggcgggacaatttcaagcggcacat
cactatgtcgattccctcgatagcttcggccagtcagtcgcacacgcgattgaagaaaaa
ggcataagcgtctggcgcgcctatcatatagcaggattagaactggatattctgtgccgt
tatggtaaccaatatttagcaatagatttaatcggttacccagggccttgggcggacttt
ttcgatattgatatgtataagctgttgcagcgcgcaggcattaaacttatccccgtcagt
tacggactatggtgccaacagcgagaactttgtatccagcatatttgtcagcaattgggt
attccccagccacgctaa
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