Shewanella sp. JNE2: MZ182_00380
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Entry
MZ182_00380 CDS
T08546
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
shej
Shewanella sp. JNE2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
AAA_16
AAA_2
AAA_3
nSTAND3
HTH_30
MCM
ATPase
Torsin
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UPO31351
UniProt:
A0A9Q8S492
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Position
87133..88515
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AA seq
460 aa
AA seq
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MSQIDKNLKPLPLAVSVLIVDDEPGMRSFLNKALSKKFALVETAGSIEDAEQLRSRCHFD
LLIVDIRLPGRSGIEWHEALDEQGRRSDIIFMTGYADMEVAITALRAGASDFIMKPFHLD
QMMAAVDRCIERRLLKRENLMLRREVSIGYSSTIIGSSEAMESVKHVIERVAPTNAVVLI
QGESGTGKELVARQLHLLSGRQGPFVPVNCGSIAPELLESELFGHVAGAFTGAKGNREGL
FSFASGGTIFLDEIGEMPLKMQTALLRVLEQKAIRPVGSEKEVNIDVRVIAATNRTLLEE
VDAGNFRRDLYYRLNVLDILIPPLRDRPEDIVELTHHFTRQLAAELGVREVVWSHEDMVK
LQQHEWPGNIRELRNMIERCILLGKPPAEYWKQQVKSESSASQGYPLDWPLKDVEKHHVT
SVVDLHSGNKSAAARDLGVSRKTLDRKYKEWFGLSDEQES
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagccagattgataaaaacctcaagcctctccctctagccgtatcagtgcttatcgtc
gacgatgagcctggaatgcgaagttttttaaataaagccctttcgaagaagtttgcctta
gtcgaaaccgctggcagtattgaggatgcggagcaattacgtagccgctgccatttcgac
ttgctgattgtcgatattcgtttgccggggcgctctggtattgaatggcatgaggcatta
gatgagcaggggcgtcgctcggatattatctttatgacgggctatgccgatatggaagtg
gcaatcacagcgctgcgggcgggtgcttccgattttattatgaagccttttcatcttgat
cagatgatggcggctgtagatcgttgcattgagcgtcgtttactcaagcgcgaaaatctg
atgctgcgccgtgaggtatctattgggtattcatcgaccattattggcagtagcgaggcc
atggagtcagtaaaacatgtgatagaacgtgtagctccaactaatgccgttgtgcttata
caaggtgaatcaggtaccggtaaagaactcgtcgcaagacaactgcatttattgagtggc
cgacaagggccatttgtacccgttaactgcggctctattgcccctgagttgctcgagagt
gaactctttggccatgttgcgggtgcatttacgggggcgaagggaaatcgagaagggtta
tttagtttcgcctctggtgggacgatttttctggatgaaataggtgaaatgccactgaaa
atgcagacagcgttgcttagagtgttagagcaaaaagcgatccgacctgtcggcagtgaa
aaagaagtgaatattgatgttcgggttattgctgcaaccaaccgaaccctcttggaagag
gttgatgctgggaacttccgtcgagatttgtattatcgactcaatgtgctcgacatctta
attccgccgttaagggatcgccctgaggatatcgttgagctaacccatcactttactcgt
cagcttgccgctgagcttggggtcagggaagtagtgtggagccatgaggatatggttaag
ctacaacagcatgaatggccgggtaatatccgtgagctgcgtaatatgatcgagcgttgt
attttacttggtaaaccccccgcggaatattggaaacaacaggtaaagagtgaatcttca
gcttcccaaggttatcccttagattggccattaaaggatgtcgaaaaacatcatgtcacc
agcgtggtagatttacattctggtaataaatctgcggcagcgagagacttaggtgtttct
cgtaaaaccttagatcgtaaatataaagagtggtttggcttaagcgacgaacaggagtct
tag
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