Shewanella sp. JNE2: MZ182_07735
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Entry
MZ182_07735 CDS
T08546
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
shej
Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shej03009
]
MZ182_07735 (rluC)
Enzymes [BR:
shej01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
MZ182_07735 (rluC)
Ribosome biogenesis [BR:
shej03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MZ182_07735 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3603
Motif
Other DBs
NCBI-ProteinID:
UPO32713
UniProt:
A0A9Q8S8Y0
LinkDB
All DBs
Position
1736187..1737149
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AA seq
320 aa
AA seq
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MNTISTPQQQVQLITIDEDHFEQRIDNFLMTALKGVPKSMIYRIVRKGEVRVNKKRIKPE
YKLQMGDIVRIPPVRVAESDNRTAPSANLSKVSQLEDRILHEDNHLIVLNKPAGIAVHGG
SGVDYGVIEALRSLRPQQKFLELVHRLDKDTSGVLLVAKKRSALKHLHDQLRYKKMQKDY
LALVKGEWSAQDKVVKQPLLKITLKSGERIVRVNAEGKPSETRFKIMQRYQGCTLVKASP
VTGRTHQIRVHCQFAGHPIACDDKYSEQGFDDSVRSLGLTRLFLHAAELMFIHPENDEVM
RVSAPLDENLSQLLDKLKRA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaatatccaccccacagcaacaggttcaattgatcacgattgatgaagatcat
ttcgaacagcgaatcgacaactttttaatgacggctcttaagggcgtacctaagagcatg
atctaccgcatcgtccgcaagggtgaggtgcgggtcaataagaaacgtatcaaacctgag
tataagttgcagatgggtgacatagtgcgtatcccgcccgtcagagtggcggagtcggat
aatcgtaccgcgccttcagccaacttaagcaaagtctcgcaacttgaagatcgtattctg
catgaagataatcatttaattgtgctgaataaacctgcaggtattgccgtgcatggtggt
agtggtgttgattacggtgtgattgaagcgctgcggtcgttaagaccacagcaaaagttt
ttagagctagtgcatcgtctcgataaagatacttcgggtgtgttgttggtggctaaaaag
cgtagcgcgcttaaacatttgcatgatcaacttagatataaaaagatgcagaaagactat
ttggccttagttaaaggtgaatggtctgctcaagataaagtcgttaaacagcctttactg
aagattacgcttaagtccggtgagcgcatagtgcgtgttaatgcggaaggtaagccttct
gaaacgcgctttaaaattatgcagcggtaccagggttgtactttagtgaaggcgagtcct
gtcactggacgtactcatcaaattcgggtgcattgccaatttgccggacatcctatcgcc
tgtgatgataaatacagtgagcaagggtttgatgacagcgtgcgttcattaggtttaacc
cgactctttttacatgccgctgaattgatgttcattcatccagaaaatgatgaagtgatg
cgggtttcagcgcctttagatgaaaatttgtcgcagttactcgataagttaaaacgtgcg
taa
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