Shewanella sp. JNE2: MZ182_13395
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Entry
MZ182_13395 CDS
T08546
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
shej
Shewanella sp. JNE2
Pathway
shej00521
Streptomycin biosynthesis
shej00523
Polyketide sugar unit biosynthesis
shej00541
O-Antigen nucleotide sugar biosynthesis
shej01100
Metabolic pathways
shej01110
Biosynthesis of secondary metabolites
shej01250
Biosynthesis of nucleotide sugars
Module
shej_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
MZ182_13395 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MZ182_13395 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MZ182_13395 (rfbC)
Enzymes [BR:
shej01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MZ182_13395 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UPO30010
UniProt:
A0A9Q8S3H0
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Position
complement(3002166..3002720)
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AA seq
184 aa
AA seq
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MLIIDTKIPEVKIIEPKVFGDERGFFFESFNQQQFEAAVGYPVNFVQDNHSKSSKGVLRG
LHYQLPPHAQGKLVRCVVGEVFDVAVDIRKSSPTFGQWVGVHLSADNKRQLWIPEGFAHG
FVTLSDTADFLYKTTNYYAPQSECAIRWDDAQVQIEWPIPIEGEVSLSKKDEEAMSFQLA
TTFD
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcatcgatacaaaaatccctgaagttaaaatcattgagccaaaagtctttggc
gatgaacgcggctttttctttgaaagttttaaccaacagcaatttgaagcggccgttggt
tatccagtcaattttgtgcaggataaccactcaaaatcgagcaaaggagtattgcgcggt
ttgcattatcaactgccgccccatgctcagggtaaattagtgcgctgtgtggtgggcgag
gtattcgatgtagcggtggatattcgcaaaagctcaccgacctttggccagtgggtggga
gtacacctctctgcagacaacaaacgccaactgtggatcccggaaggctttgcacatggc
tttgtgaccttaagtgatacggcagattttttgtataagaccactaattattatgcaccg
cagagtgagtgcgctattcgttgggatgacgcacaagtgcagatagagtggcctattcct
attgaaggagaagtgagtttatctaagaaagatgaagaagcgatgagttttcaattagct
accacattcgattaa
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