Shewanella sp. WE21: CKQ84_11310
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Entry
CKQ84_11310 CDS
T05404
Name
(GenBank) acriflavin resistance protein
KO
K18138
multidrug efflux pump
Organism
shew
Shewanella sp. WE21
Pathway
shew01501
beta-Lactam resistance
shew01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CKQ84_11310
01503 Cationic antimicrobial peptide (CAMP) resistance
CKQ84_11310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_11310
01504 Antimicrobial resistance genes [BR:
shew01504
]
CKQ84_11310
Transporters [BR:
shew02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CKQ84_11310
Antimicrobial resistance genes [BR:
shew01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CKQ84_11310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
MMPL
Patched
Motif
Other DBs
NCBI-ProteinID:
AVI66417
LinkDB
All DBs
Position
2611858..2614929
Genome browser
AA seq
1023 aa
AA seq
DB search
MRLPEVCIRHPIFASVLSIMAVLLGLIAFQKLDIQYFPEHTTHSASVNASIAGASADFMS
SNVADKLIAAASGIDKVDTMSTDCSEGRCSLTIKFNDDTSDIEYTNLMNKLRSSVEGIND
FPQSMIDKPTVTDDTSATDSASNIITFVNAGGMEKQAMYDYISQQLVPQLKQVQGVGAVW
GPYGGSQKAVRVWLNPEQMKALNIKAADVVGTLGSYNASFTSGAIKGKSRDFSINPLNQV
ETLEDVKDLVIKVSEGKIIRVSDVADVVMGEESLSPSMLSIGGHSAMSLQILPLSNANPV
TVASNIKAEIARMQKHLPQGLEMNLAYNQADFIEASIDEGFSALIEAVILVSLIVVLFLG
SLRAASIPIITIPVCVIGVFAVMSALGFSINVLTILAIILAIGLVVDDAIVVVENCYRHI
ENGETPFNAAIKGCQEIIFPIIAMTLTLAAVYLPIGLMSGLTADLFRQFSFTLAAAVMIS
GVVALTLSPMMSAYLINTTEQHPKWFSRVENALQQLNHLYINELNKWFFRKRLMFGVAVV
LVGLAGIAYWQLPKILLPAEDSGFIDVASNGPTGVGRQYHLNHNAELNSVMNEHPAVGAN
LSYIEGEPVNHVLLKPWGERSEGIDDVISDLITTSKENVSAYNMSFSIRSANNLNIANNL
RLELTTLDRNKDELSETAAKVQKLLEDYPGLNNVGNSVLRDQLRYDLSIDRNAIILSGVS
YGDVTNALSTFLGSVKAADLHATDGFTYPIQVQVNLDKLSDFKVLNKLYVTSESGQALPL
SQFVSIKQTTAESNIKTFMGLDSAELTADIMPGYSTDEIKTYLDEQLPTLLNDAQGFKYN
GVVKDLMDSQAGTQSLFLLALVFIYLILAAQFESFVDPLIILLTVPLCIVGALLTLALFG
QSVNIYSQIGLLTLVGLVTKHGILLVEFANKQQDQGLSAIEAARSSAKSRLRPILMTSLT
MILSAIPLALASGPGSLGLANIGLVLVGGLLAGTFFSLFVVPVAYVAMAELKAKDVLARL
RSA
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttacccgaagtctgtattcgtcatcctatcttcgcctccgtactcagtattatg
gctgtgttactgggcttgattgcctttcaaaaactcgatatccaatacttccctgagcat
accacccactcggcatctgtgaatgcgtcgattgcaggggcgagcgccgattttatgtcg
agtaacgtggccgataagttgattgctgcggcttcgggtatagataaagtcgataccatg
tcgaccgactgtagcgaggggcgttgctcattaacgattaaattcaatgatgacaccagc
gatattgaatacaccaacttaatgaacaagttgcgtagcagcgtcgaagggattaacgat
ttcccccagagcatgatagataagcccacagttactgacgatacttcggccacggattcg
gccagtaatatcatcacctttgtgaacgcgggtggcatggaaaagcaggctatgtacgac
tacattagccagcagttagtaccgcaactcaaacaagttcaaggcgttggtgccgtttgg
gggccctatggtggctcacaaaaggcggtcagagtctggctcaatcctgaacaaatgaag
gcgttgaatattaaagctgccgatgtggtgggcacgttaggctcctacaatgccagtttt
acctcgggcgcgatcaaaggtaagtcgcgggatttctcgattaaccctttgaatcaagtt
gaaacgcttgaagacgtgaaggatctggtgattaaggttagcgagggtaagatcatccgc
gtgtccgatgtcgccgatgtggtgatgggcgaggaaagtctgtcgccgagtatgttgtct
atcggtggacatagtgcaatgtcattgcagattttaccgctgagcaacgctaacccagtg
acagtggcttcgaacattaaagccgaaattgcacgcatgcaaaaacatttaccccaaggc
ttagaaatgaacttggcttataaccaagctgattttattgaagcctccatcgacgaagga
ttttctgcgttgattgaagcggtgatcttagtttcgctgattgtggtgttatttttgggt
agcctgcgggcggcatcgatccccattattaccattcccgtgtgcgtgattggggtgttt
gctgtgatgtcggcgctcggatttagtatcaatgtgttgactattctggcgattattttg
gccattggcctggtggtggatgatgccattgtggtggtcgagaactgctatcgccatatt
gaaaacggtgaaacgcctttcaatgcggcgattaaaggctgtcaggagatcattttccct
atcattgcgatgacgttaacgctcgccgccgtgtatctgccgatcggattaatgtcgggc
ttaaccgccgatctgtttcggcaattttcctttaccttagcagcggccgtgatgatctct
ggcgtggtggcgttaactttgtcgcctatgatgagcgcttatcttatcaataccactgag
caacaccctaaatggtttagccgagtcgagaatgcgctgcagcagttaaatcatttgtat
atcaatgagctgaataagtggtttttccgcaagcgcttgatgtttggtgtggctgtggtt
ttggtgggtcttgcgggtattgcttactggcaattacccaaaatactcttgcctgcggag
gactctggctttattgatgtggcgtctaatggtcctaccggtgtcggtcggcagtatcat
ctcaatcacaatgctgagcttaatagcgtgatgaatgagcatcccgcggttggggctaac
ttgtcctatatcgagggagagccagtgaaccatgtactactcaaaccttggggtgagcgc
agtgagggtatagatgatgtgatcagcgacttgattacaacatcaaaggaaaacgtttct
gcctataacatgtcgtttagcattcgctcagcgaataatcttaatattgccaataatttg
cgtttagagctgacgaccttagatcggaataaggacgaactcagcgaaaccgccgccaaa
gtgcaaaaattactcgaggattatcctggcctgaataacgtgggtaactcagtgcttagg
gatcaactacgctacgatctgtctatcgatcgcaacgccattatcctctctggtgtgagt
tatggtgatgtcactaatgcactttctacctttcttggctcagtgaaggcggcggactta
catgctaccgatggttttacttatcctattcaagtgcaagtaaacttagacaaactgagt
gattttaaagtgttgaataagctgtatgtcacttcagaatcagggcaagcactgccattg
tcgcaatttgtgtcgattaaacagactacggcagaatctaacattaagacgtttatgggt
cttgatagcgctgaattaacggcagatattatgcccggctattcaactgatgaaatcaaa
acctacttagatgaacaattaccgacattgcttaatgatgcccaaggctttaaatacaat
ggcgtggtaaaggatcttatggattcgcaggcgggcactcagtcgctattcttgctggca
ttggtgtttatctatttgattttggctgcgcagttcgaaagttttgtcgatcccttaatt
atcttactgacagtgcccttgtgtattgtcggtgcgttattgaccttagccttgtttggc
cagagtgtgaatatctattcgcagattggtttattaaccttagtggggctagtgactaag
cacggtatcttgctggtggagtttgccaacaagcaacaagaccaaggtttgagtgcgatt
gaggcggcgcgaagcagtgccaaatctcgtttaagaccgattctaatgacgtctttaacc
atgattttaagtgcgattcctttagccttggcatcgggaccgggctcgttagggttagct
aacataggtttagtcttagtcggaggtctgttagcgggcactttcttctcgttatttgta
gtgcctgtggcctatgtcgctatggcggaattgaaggccaaggatgtgcttgctagactg
cgaagtgcttaa
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