Shewanella sp. WE21: CKQ84_21130
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Entry
CKQ84_21130 CDS
T05404
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shew03009
]
CKQ84_21130
Enzymes [BR:
shew01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
CKQ84_21130
Ribosome biogenesis [BR:
shew03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CKQ84_21130
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
YebU_pre-PUA_dom
Methyltranf_PUA
Methyltransf_31
Cons_hypoth95
PCMT
Methyltransf_25
NSUN5_fdxn-like
Motif
Other DBs
NCBI-ProteinID:
AVI68134
UniProt:
A0A2R3F1G4
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Position
4745923..4747368
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AA seq
481 aa
AA seq
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MVQLNQNFIDTITQELPAHLSMDEFIAACDRPLRRSIRVNTLKISSDDFKTLMQPKGWTF
DPIPWCEDGFWISYDEEEQLGNALEHIQGLFYIQEASSMLPPTALFTPNAHWQCVLDLAS
APGSKTTQMAALMRNQGLLVANEYSASRVKVLHANVLRMGASHCALTHFDGRVFGEYLYE
SFDAVLIDAPCGGEGTVRKDADALKHWSLDDVLAISETQKALIESAFLALKPGGSLVYST
CTLNRLENQGVCEYLKQVYGNAVQFESLSDLFDGADRATTPEGFLHVWPQIYDSEGFFVA
KLTKTASVPRLQPEPTLQKNFPFTPASAKQAQGIKDYFQQDLGISLPDELIMVRDDEFWL
FPHEFNAFIGRMRFQRIGIKLADNSKHGFKVRHEAIIALAGKQLSPTAKTVNVSDVEAKE
YLMGRDIALNTAVKAQGEVIVCYGGAPLGMAKHLGNKLKNNLPRDLVKDKVLLLPEQTKS
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggtccaattaaatcaaaattttatcgatacaatcacccaagaactccccgcccattta
tccatggacgagtttattgccgcctgcgacaggccgcttagacgttcaattcgggtcaat
accttaaaaatcagcagtgacgactttaagaccttgatgcaacctaagggctggacgttc
gatcctattccttggtgtgaagacggattttggatcagttacgacgaagaagaacaactc
ggcaatgccttagagcacattcagggcctattctacattcaagaagccagctctatgttg
ccgccgaccgcactttttacaccgaatgcacattggcagtgcgtactcgatctcgcctcc
gcacccggttcaaaaaccactcaaatggccgcattgatgcgaaaccaaggcttattggtg
gctaatgagtattcggcgagccgcgtaaaagtattgcacgccaatgtgctgcgcatgggc
gcgagccactgcgccctcacccatttcgatggccgtgtatttggcgaatacctgtacgaa
agttttgatgccgtgcttatcgatgcaccctgtggcggtgaaggtacagtgcgtaaagac
gccgatgcgctaaaacactggagcctagacgatgtgctggcgattagcgaaacccaaaaa
gccttaatcgaatcggcgtttctcgccctgaaacccggtggcagtttggtctactcaacc
tgcaccttaaaccgcctcgaaaaccaaggcgtgtgcgagtatttaaaacaagtctacggc
aatgcggtgcaatttgaatccttaagcgatttatttgatggtgcagatcgagctacaacg
cccgaaggcttcttacatgtctggccacagatttacgacagtgaaggtttctttgtcgct
aaattgacaaaaacggcctcagtgccgcgtttacaaccagagcctacactacagaaaaac
tttcccttcacgcccgcatcagcgaaacaagcccaagggatcaaagactattttcagcag
gatttaggcatcagcttaccggacgaactcatcatggttcgcgatgatgaattctggcta
ttcccgcatgaattcaacgcttttatcggccgtatgcgctttcagcgtattggcattaaa
ctcgccgataacagtaaacacggctttaaagtccgccatgaagcgattattgcattagca
ggaaaacagctcagcccaaccgcaaaaacggtcaatgtgagcgatgttgaagcgaaagag
tatttgatggggcgagatattgccctaaacaccgcagtgaaagctcaaggtgaagtgatc
gtctgttatggcggagcaccattaggcatggcgaaacatttaggcaataagttaaaaaac
aatctacccagagacttagtgaaagataaagtgttactgctaccagaacagacaaaatcg
ttataa
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