Shewanella sp. FDAARGOS_354: CEQ32_00920
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Entry
CEQ32_00920 CDS
T04944
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf00521
Streptomycin biosynthesis
shf00523
Polyketide sugar unit biosynthesis
shf00541
O-Antigen nucleotide sugar biosynthesis
shf01100
Metabolic pathways
shf01110
Biosynthesis of secondary metabolites
shf01250
Biosynthesis of nucleotide sugars
Module
shf_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CEQ32_00920 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CEQ32_00920 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CEQ32_00920 (rfbC)
Enzymes [BR:
shf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CEQ32_00920 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AVL27090
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All DBs
Position
180085..180627
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AA seq
180 aa
AA seq
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MKCVETELAEVLVFEPKVFGDERGFFMETFRQAYFTECLLSRGFEAPALVQDNYSRSQQH
VLRGLHYQQQYPQGKLVRVCAGSIFDVAVDIRPQSATYGKWVGRILSADNHLQMWIPPGF
AHGFYVLSEYADVLYRCSDYYAPDDEYVLAWNSAEFTIEWPLLNNTPILSARDANAAVSV
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcgttgaaaccgagctggctgaagtactagtctttgaacctaaggtatttggc
gatgagcgtggcttttttatggaaacctttcggcaagcgtattttactgagtgcttgctg
agtcgcggatttgaagcgccagcgttagtgcaagataactatagtcgctcgcagcagcat
gtattgcgtggattgcattaccagcaacaatatccgcagggcaaattagtccgagtgtgt
gctggcagtatttttgatgttgccgtcgatattcggccacaatccgcgacctatggcaaa
tgggttggcaggattctttctgcggataatcatttgcaaatgtggatccccccagggttt
gcccacgggttttatgtgttaagtgagtatgcagatgtgttgtatcgttgcagcgattat
tatgcgccggatgatgaatatgtacttgcttggaatagtgccgagtttacgattgagtgg
ccactgttaaataacacacccattctttccgcaagagatgccaatgccgccgttagcgtc
taa
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