Shewanella sp. FDAARGOS_354: CEQ32_02755
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Entry
CEQ32_02755 CDS
T04944
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shf03400
]
CEQ32_02755
DNA repair and recombination proteins [BR:
shf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
CEQ32_02755
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
Helicase_C_2
AAA_16
SLFN-g3_helicase
AAA_22
DUF2987
DZR
zf-tcix
zinc_ribbon_2
UPF0547
MgtE_N
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
ASF14055
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Position
complement(586012..587784)
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AA seq
590 aa
AA seq
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MSVNSSPSVTLRDYQQQAVDAAIAHFKKSTDSAVLVLPTGAGKSIVIAELARIARGRVLV
LTHVKELVAQNAQKVGLLTTEASIYSAGLNQKSTDGKTVVASIQSAVRALTQFDEPFSLV
IIDECHRVSLEKTSQYQQILSHLQQRNPKLKLLGLTASPYRLGTGWIYKRHYHGKVGSPE
LGVFEQCIFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQIKPNDNSEYPEAQVNALLNHA
GRATTAIVKQLIELSHHRQGIIIFAATVRHAEEIVSQLNKDHREQTAIVTAQTPDNERDE
LIERFKAKELKFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMIGRGLRICEGKKDC
LVIDYAANGYDLYFPEVGQAKPNSKSVPVQVHCPVCQFANIFWGLTDKDGDIIEHFGRRC
QGIVEHHGQKQQCDFRFRSKSCPDCGQENDIAARICQHCHSTLIDPDKRLKQVLNKQHHH
LFRCQHMTLMDDAGDLKVQYLDIDGNEFNRHFKLQTPAQWRALYALFIFPHSRTPGIKPK
QYKKVSELIADSAAFRMPDLLLLKKHKKGWDLLESYFDYQGRYQTENKHI
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagttaattccagcccaagcgttaccctcagggattatcagcaacaagccgtcgat
gccgccatcgcgcatttcaaaaaaagcaccgattccgccgtgttagtcctacccacgggt
gccgggaaaagtatcgttattgccgagcttgcccgcatcgccagaggacgagtgctcgtt
ttaacccatgtgaaggaactggttgcccaaaacgcgcaaaaggtgggattactgacgact
gaggccagcatttactccgctgggttaaatcaaaaatcgactgacggcaaaaccgtcgtg
gccagtatccagtccgccgtgcgcgccttaactcaattcgatgagcccttctcgctagtg
attatcgatgaatgccacagagtcagcctcgaaaaaaccagccaatatcagcagatatta
agtcatttacagcagcgtaatccaaagctcaaattattaggcctgactgccagcccttat
cgactgggcactggctggatttataaacgccactaccacggcaaagtcggctcgcccgag
cttggggtcttcgagcagtgtattttcgagcttcccatccgtccgctgattaagcaaggc
tatttaactgcgcccaccttgttcgatgggttaagtgcccaatatgacttcagccaaatc
aagcccaatgacaatagcgaatatcccgaggcccaagttaatgcgctgctgaaccacgcc
ggacgcgcgacaacggcgattgtgaagcaactgattgaactgagtcatcatcgccaaggg
atcattatttttgccgcgacagtgcgccatgctgaagaaattgtcagccagctcaacaag
gatcacagggagcaaacagcaatcgtcacggcgcaaacgccagataatgaacgtgatgag
cttatcgagcgctttaaagcgaaggagcttaagttcctcgtcaacgtcgcggtattaacc
actggcttcgatgcgccccatgtggatttgattgcgattttacgccccaccgcatcggtg
agtttgtttcagcaaatgattggccgaggccttaggatctgtgaaggtaaaaaagattgt
ttagtgattgattacgcggccaatggttatgatttgtattttccagaagtcggccaagct
aagcccaatagtaagtcggttccggtacaagtgcattgccctgtctgccagtttgccaat
atcttttggggattaaccgacaaggatggcgatattatcgagcactttggccgtcgctgt
cagggcattgtcgagcatcatgggcaaaagcaacaatgtgactttcgatttaggtctaaa
tcctgtcccgattgcggacaagagaacgacattgcggcgcgtatttgccagcattgccat
tcgaccttaatcgaccccgataaacgccttaagcaagtattgaataagcaacaccatcat
ctgttccgctgccagcatatgacgttaatggatgatgcaggcgatcttaaggtgcaatat
ctagacattgacggaaatgagtttaatcggcactttaagctgcaaacacccgcccaatgg
cgtgccttgtatgcgctgtttattttcccccatagtcgcacgccaggcattaaacctaag
caatacaaaaaagtgtctgagctgattgccgatagtgccgcctttcggatgccagatctg
ttactgcttaaaaagcacaaaaaaggctgggatttgctcgaaagctatttcgattaccaa
ggccgctatcaaactgaaaataaacacatctga
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