Shewanella sp. FDAARGOS_354: CEQ32_11575
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Entry
CEQ32_11575 CDS
T04944
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shf03009
]
CEQ32_11575 (rumB)
Enzymes [BR:
shf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
CEQ32_11575 (rumB)
Ribosome biogenesis [BR:
shf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CEQ32_11575 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
Cons_hypoth95
Methyltransf_25
Methyltransf_12
UPF0020
Motif
Other DBs
NCBI-ProteinID:
ASF15548
LinkDB
All DBs
Position
complement(2562384..2563538)
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AA seq
384 aa
AA seq
DB search
MSTLVQCGYFEQGQCQSCRHIKLPMSMQLAAKTQELQQLLAPFVEHTNTQFLPPVVGENQ
GFRNKAKMVVLGAAHAPVLGIVSPSGEAVSLCDCLLYPADMQALLHRLERFVQQAGIPPY
RIDKAKGELKFILLTRSQVRGEYMLRFVLRSSDAIARIERELPALLAEYPQISVVSVNIQ
PIHMAILEGDEEIFLTENTRLEERFNDVPLFIRPKSFFQTNPQVAAKLYQTAREWVGEFA
PKSLWDLFCGVGGFGLHCASKDIPLTGIEIEAEAIACAKMSAQMMGLDNVQFMALDSTDF
AKGDAAQTKPDLIIVNPPRRGIGESLCHALSEFAPRAILYSSCNPKTLAKDLAHIRGYRL
TKVQLFDLFPHSDHFEVLAMLVKD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacattagtgcaatgtgggtattttgaacaaggccaatgccaatcctgtcgtcat
attaagctccctatgtcgatgcaattagcggcgaaaacccaagaattacagcaattgtta
gccccatttgttgagcatactaatacccaatttttgccgcccgtagtgggtgagaaccaa
ggttttcgtaacaaggcgaaaatggtggtgctgggcgcggctcatgcgcctgtactgggg
attgtcagtccaagcggtgaggcggtgagtctctgtgactgcttgctgtatcctgctgat
atgcaagcgttgctccaccgtctggagcgttttgtgcagcaagcgggtatcccgccgtat
cgtatcgataaagccaagggcgagcttaagtttattctactgacgcgcagccaagtgcgc
ggcgaatatatgctgcgttttgtgctgcgctcatccgatgccattgcccgtattgaacgg
gaattacccgcgttgctggctgaatatccacaaatcagcgtcgtatcggtaaatattcag
cccattcatatggcgatccttgaaggggatgaggaaattttcttaactgaaaatactcgt
cttgaagagcgctttaacgatgtgcctttgtttattcgcccaaaaagcttttttcaaacg
aatccacaggttgctgcaaagctgtatcaaaccgcccgtgagtgggttggtgaatttgca
ccaaagtccctgtgggatttattttgtggtgtgggcggttttggcttgcactgcgcctcc
aaagatatccctttaactgggattgaaatcgaagccgaggcgattgcgtgcgctaagatg
tcggcgcaaatgatggggctggataacgtgcagtttatggccctcgactctaccgatttt
gccaagggtgatgcggcgcaaacaaagcccgatttgattattgtcaatccgccgcgtcgt
gggattggtgagtccctgtgtcacgccttaagtgaatttgcccctagggcgattttgtat
tccagttgtaatcccaaaacccttgctaaagatctcgcccatattcgtggctatcgatta
actaaggtgcagttgttcgatctctttccccattcggatcatttcgaagtcttagccatg
ttggtaaaagattaa
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