Shewanella sp. FDAARGOS_354: CEQ32_15690
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Entry
CEQ32_15690 CDS
T04944
Name
(GenBank) AcrB/AcrD/AcrF family protein
KO
K18138
multidrug efflux pump
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf01501
beta-Lactam resistance
shf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CEQ32_15690
01503 Cationic antimicrobial peptide (CAMP) resistance
CEQ32_15690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shf02000
]
CEQ32_15690
01504 Antimicrobial resistance genes [BR:
shf01504
]
CEQ32_15690
Transporters [BR:
shf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CEQ32_15690
Antimicrobial resistance genes [BR:
shf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CEQ32_15690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
ASF16300
LinkDB
All DBs
Position
complement(3513700..3516834)
Genome browser
AA seq
1044 aa
AA seq
DB search
MARFFIDRPIFAWVIALIIMLAGVLSIRSLPVSQYPSIAPPTVVISANYPGASAKIVEDS
VTQVIEQRMKGIDHLRYIASTSDSFGNASITLTFNAEADPDIAQVQVQNKLQGAMTLLPQ
EVQSQGVNVNKSSSGFLMVLGFVSTDGSLDKGDIADYVGANIQDPMSRVPGVGEIQIFGA
QYAMRIWLDPLKLTQYNLTSLDVVSAIRAQNAQVSAGQLGGTPSLPGQELNATVSAQSRL
QTPEQFRKIILKSDTSGANVFLGDVARVELGSESYAVESLYNGKPASGIAIKLATGANAL
DTAAAVRAKVEELRPFFPAGLDVVYPYDTTPFVDKSIEGVVHTLLEAIVLVFVIMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSATGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
AEEGLSPLEATRKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSITIVSAMAL
SVLVALILTPALCATMLKPLKKGHGHIETGFFGWFNRGFDRLTNRYESSVAGIVKRGFRV
MMIYAALVVAVGWIFMRMPTAFLPDEDQGILFTQAILPTNSTQESTMKVLEKVSDHFMAE
EGVRSVFSVAGFSFAGQGQNMGIAFVGLKDWSEREAPGMDVQSIAGRAMGVFSQMKEAFV
FAFVPPAVIELGTANGFDMYLQDKNGQGHDKLVAARNQLLGMAAQNPNLVGVRPNGQEDA
PIYQLHIDHAKLSALGVEIANVNNVLATAWGGSYVNDFIDRGRVKKVFVQGDAQYRMQPE
DLDTWYVRNNKGDMVPFSAFATGSWEYGSPRLERFNGLPAVNIQGATAPGFSTGAAMNIM
EDLVKQLPPGFGIEWNGLSYEERLSGNQAPALYALSILVVFLVLAALYESWSVPFAVILV
VPLGIIGALLAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEFYEKGAGLVEATL
HAVRVRLRPILMTSLAFGLGVVPLAISTGVGSGSQNAIGTGVLGGMMSSTFLGIFFVPLF
FVIVERIFSKRERKAKDEKPTSAE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttttttattgatcgccccatctttgcgtgggtgatcgccttaatcattatg
ttggcgggggttctgtcgatccgatccctgccagtctcgcagtaccctagtattgcgcca
ccgacagtggtgatcagtgcgaactacccaggtgcatcggccaaaatcgttgaagactca
gtgactcaggtgattgagcaacgtatgaagggtatcgaccacctacgttatatcgcatca
accagtgatagctttggtaacgcttctattaccttgacctttaacgcggaagccgatccg
gatatcgcgcaggttcaggttcagaacaagttacagggtgcaatgactttgttaccacaa
gaggtgcaatctcaaggggttaacgttaacaagtcaagctctggcttcctgatggtattg
ggcttcgtatcgaccgacggttctttggacaagggtgacatcgccgactatgtgggcgct
aacatccaagatcctatgagccgtgtaccgggcgtgggtgaaattcagattttcggtgct
cagtacgcgatgcgtatatggttagacccgctgaaactgactcaatataacctcactagc
ttagatgtggtgagtgctatccgcgcgcaaaacgcacaggtatctgccggtcaacttggt
ggtacgccatcactgccaggacaagagctgaacgcgactgtatcggcacagagccgtctg
caaacgccagaacaattccgcaagattattcttaaatccgatacgtcgggtgcgaacgtg
ttcttgggtgatgtggcgcgtgtcgagttgggttcagaaagttatgccgtagagtctctg
tataatggtaaacctgcctcgggtattgcgattaagctggcaaccggtgctaacgcctta
gatacggcggcagcggttcgcgctaaagttgaagagttgcgtcccttcttccctgctggg
ttagatgtggtttacccctacgatacgacaccattcgttgataaatcgattgaaggcgta
gtccacactctgcttgaagcgatcgtactggtgttcgtcatcatgtacctcttcctgcag
aacttccgtgcgacattaattccaacaattgcagtacctgtggtattgctgggtaccttt
gcgattctctctgcaacgggcttctccatcaacaccctcaccatgtttgcaatggtattg
gcgattggtctactcgtggacgacgcgattgtggtggttgaaaacgttgagcgggtgatg
gccgaagagggcttaagtccactcgaagcgacccgtaagtcgatggatcaaattactggc
gcgttagtcggtataggtctgaccttgtctgcggtattcgtacctatggcgtttatgtcg
ggttctactggggtaatttaccgtcagttctcgatcactatcgtttctgcgatggcgctg
tctgtgctggtggccttgattttaacccccgcactctgtgcgactatgctcaaaccgttg
aagaagggtcatggccatatcgaaacgggtttcttcggttggtttaaccgtggtttcgat
cgcttaacgaaccgttacgaatcgagcgtggctggcattgtgaagcgtggcttcagggtc
atgatgatttacgctgcattagtggtggcagtgggctggattttcatgcgcatgccaacg
gcattcttaccagacgaagaccaaggtatcttgttcacgcaggcaattttgccaaccaac
tctacccaagaaagcaccatgaaagtgttagagaaagtctctgatcactttatggctgaa
gaaggcgtaaggtcggtatttagtgttgcgggcttcagttttgcgggtcaaggccagaac
atgggtattgccttcgttggcttgaaggattggtcagagcgtgaagcgccaggtatggat
gtacaatccattgcgggccgcgctatgggtgtattcagccaaatgaaagaagccttcgta
ttcgccttcgtaccgccagcggtcatcgagttgggtacggccaatggtttcgatatgtac
ctgcaagataaaaacggccaaggtcacgataagttagtggcggcgcgtaaccaattgctg
ggtatggcagctcaaaatccaaaccttgtgggggttcgccctaatggtcaggaagatgcg
ccaatttatcaattgcacattgatcatgctaagttgagcgcattaggcgttgagattgct
aacgttaacaatgtgttggcaacggcgtggggtggttcttatgttaacgactttattgac
cgtggccgtgttaaaaaggtatttgtgcaaggtgatgctcaataccgtatgcagccagaa
gacctagacacttggtatgtgcgtaacaacaagggcgatatggtgccgttttcagccttt
gcgacaggttcttgggaatacggctcaccacgtctagaacgttttaacggtttacctgcg
gtgaatattcaaggcgcaacagcacctggctttagtactggtgcggccatgaatattatg
gaagacctagttaaacagttaccaccgggctttggcatcgagtggaacggcttatcctat
gaggagcgtttatcgggtaaccaagcgcctgcgctatatgcgttgtcgattctggtggta
ttcctcgtattggctgcactgtatgagagctggtctgttccgtttgcggtaatcctagtg
gttccgctaggtattatcggtgccctgctggcgatgaatggccgtggcttgccaaacgac
gtgttcttccaagtaggtctgctgacaaccgttggtttggcaaccaagaacgccatcttg
attgtggaatttgcgaaagagttctacgagaaaggggcgggtctggttgaagcgacgtta
catgctgtacgtgtgcgtttgcgtccgattctgatgacatcgctggcgtttggtttgggg
gttgtgccgttagccattagtacgggtgtaggttcaggtagccagaatgccatcggtact
ggtgtacttggcggtatgatgagttcgacgttcttaggtatcttcttcgtgccactgttc
ttcgttattgttgagcggatctttagtaaacgagagagaaaagcgaaagacgaaaagcca
acatcggcggagtaa
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