Shewanella sp. FDAARGOS_354: CEQ32_18495
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Entry
CEQ32_18495 CDS
T04944
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shf03016
]
CEQ32_18495
Enzymes [BR:
shf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
CEQ32_18495
Transfer RNA biogenesis [BR:
shf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CEQ32_18495
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ASF16793
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All DBs
Position
4105248..4105961
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AA seq
237 aa
AA seq
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MRPSNRTPAQTRPITITRQFTAHAEGSVLVEFGETKVLCTASFTEGVPRFLKGQGQGWVT
AEYGMLPRSTHSRMDREAARGKQSGRTQEIQRLIGRALRACVDMKALGENTIVIDCDVIQ
ADGGTRTASITGACVALVDALNWARGKGIIKSNPLKFLIAAVSVGIYNGEAISDLEYVED
SAAETDMNVVMTETGKIIEIQGTAEGEPFTHEELIELLGLAKNSIREIVDVQKAALN
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccaagtaacagaacgccagcacaaacacgccccattactatcactcgccaattt
acggcccatgccgaaggttctgtgttagtcgaatttggcgaaactaaagtgctttgtacc
gccagttttactgagggtgtaccgcgtttccttaaaggtcagggccaaggctgggtaacg
gcggaatacggcatgttgccacgctcaacccatagccgtatggatcgtgaagccgctcgt
ggtaaacaatctggccgcacgcaagaaattcaacgtcttatcggccgtgcgttgcgtgcc
tgtgtggatatgaaagcgctgggtgaaaacaccattgtcatcgattgtgatgtgatccaa
gctgatggcggtactcgcaccgcgtcaatcactggtgcttgtgtcgccttagtggatgcg
cttaactgggctcgtggtaaaggcattattaaatctaacccgcttaagttcttaatcgct
gcggtcagcgtgggtatctacaacggtgaagcgataagcgacctagagtatgttgaagac
agcgcagccgaaaccgatatgaacgtggtaatgacagaaaccggtaagattatcgaaatt
caaggtactgccgaaggtgaaccgtttactcacgaagagttgattgagctacttggttta
gcgaagaacagtattcgcgaaatcgtcgatgtgcagaaagccgcattaaattaa
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