Sphingobacterium sp. 21: Sph21_0972
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Entry
Sph21_0972 CDS
T01450
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
shg
Sphingobacterium sp. 21
Pathway
shg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sph21_0972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shg03021
]
Sph21_0972
Transcription machinery [BR:
shg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sph21_0972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
GerE
TPR-S
Acetyltransf_6
Motif
Other DBs
NCBI-ProteinID:
ADZ77545
UniProt:
F4CCK9
LinkDB
All DBs
Position
complement(1184668..1185267)
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AA seq
199 aa
AA seq
DB search
MQPVLETCEKALIESMRNDDAAAFEQLFERYWEHLYQRAYYRLRSRELAEDLVQDVFADF
WIQRHNLQIQSDLGGYLGAMLKYKIIRWASQQEREEELHAHLFQRMEEIEDGVISLLEVA
SLQQTINEAVRAFPENMRSVFLLRMQDYTIGEIAEVLQLADQTIRNNHTEALRRLKTKLI
ESHPHLPIYSLLTILFTKT
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgtcctggaaacatgcgaaaaggccttaatcgaaagcatgcggaacgatgac
gccgcggcttttgagcagctcttcgaacgatattgggagcacctttatcagcgagcttat
tataggctccgaagtcgggaactggccgaagaccttgtacaagatgtttttgctgatttt
tggattcaacggcacaatttacagattcaaagcgatctcggaggctatctcggcgctatg
cttaaatataaaattattcgttgggcaagccaacaagaacgcgaggaggaattgcatgcg
cacttatttcagcgaatggaagagatcgaagacggtgttattagtcttctagaagttgca
tccctacaacaaaccataaatgaggcagtgcgagcctttccggaaaacatgcggagcgtt
tttctgctgcgtatgcaagactatacgataggtgagatagccgaagtattgcaactagcc
gaccaaaccattcgaaacaaccacacggaagcgctgcgacggttgaaaaccaaactcatt
gagtcgcatccccatttgcctatttattctttactgacaatcctgtttacaaaaacttaa
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