Salvia hispanica (chia): 125189097
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Entry
125189097 CDS
T09851
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125189097
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shis01009
]
125189097
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125189097
03036 Chromosome and associated proteins [BR:
shis03036
]
125189097
Protein phosphatases and associated proteins [BR:
shis01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125189097
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125189097
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125189097
BRITE hierarchy
Motif
Pfam:
WD40
Ribosomal_S3Ae
ComGF
Motif
Other DBs
NCBI-GeneID:
125189097
NCBI-ProteinID:
XP_047942247
LinkDB
All DBs
Position
5:complement(28057247..28064870)
Genome browser
AA seq
518 aa
AA seq
DB search
MDSGDGGEVASAAAGPPTPLEWKFSQVFGERAAGEEVQEVDIISAIEFDKSGDHLATGDR
GGRVVLFERTDAKEHGGNRRDLEKMDYQVSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIRWCQTANGAVFLLSTNDKTIKFWKVQEKKMKKISEINVDSGKAAGNGGIASSSVSSS
SKKFLANGDCSDPSYNSLSNELSFPPGGLPSLRLPVVVTSGETNLLARCRRVYAHAHDYH
INSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPTHC
NMLAYSSSKGSIRLIDLRQSALCDSHSKIFEEQEAPGSRSFFTEIIASISDVKFARDGRY
LLSRDYMSLKLWDVNMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVAT
GSYSNLFRIFGCAQGSTEATTLEASKNPMRRQVQTPARPTRSLTSSISRVVRRGAESPGA
DANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggtgatggtggagaggtggcatcagctgcggccggtccacctacgccgctg
gaatggaaattctctcaggtctttggtgagcgagccgccggcgaagaagtacaggaagtg
gatatcatctctgccattgagtttgataaaagtggcgaccatctggctactggtgatcgt
ggtggaagggtggttttatttgaaaggactgatgcaaaagaacatggtggaaatcgaaga
gatttagagaagatggactaccaagtctctcgacacccagagtttcgttacaaaactgaa
tttcagagtcacgaacccgagtttgactatctaaagagtttggagattgaggagaaaatc
aacaagatcaggtggtgccagacagccaatggtgccgtctttctcctgtcaactaatgac
aaaaccattaagttttggaaggtccaagagaagaagatgaagaaaatttcagaaataaat
gtagactcgggtaaagctgctggaaacggtggtattgcaagttctagtgtctcttctagt
tccaaaaaatttcttgctaacggcgactgttcagatccttcttacaattctttgagcaat
gagttgtcctttccacctggggggctcccctctctacgattgccagtggtagtcacaagt
ggtgagaccaatcttcttgcaagatgcaggagagtatatgctcatgcacacgattaccat
atcaattctatctcaaataacagtgatggtgagacatttatatcagctgatgatctgcga
ataaatctttggaacttggaaataagcaatcaaagtttcaatatagttgatgtgaaaccg
acaaatatggaggatctgactgaggtgataacatcagcagaattccatcccactcactgc
aacatgttagcatatagtagttcaaaaggatcaattcgtcttattgatttgcgacaatct
gcactgtgcgattcacattctaaaatatttgaggagcaggaggcacctggctcgagatca
tttttcactgagattattgcttcaatttcagatgttaagtttgccagggatggcagatat
ttactgagtcgtgactacatgtcccttaagctatgggatgttaacatggattctggtcca
gtggcaaccttccaggttcacgagtatttgagaccaaagctctgtgacttgtacgaaaat
gattccatctttgataagtttgaatgctgcctaagtggtgatggtcttcgagtggctact
ggttcatacagcaatctatttcgtatatttggctgtgctcagggaagcactgaggcaact
actctagaagcaagtaaaaacccaatgagaaggcaggtccagacccctgctaggcctacc
agatccctgaccagtagcatcagccgtgtcgtgaggcgaggtgctgaaagtccgggagct
gatgccaacgggaactcgttcgatttcactactaagctgctccacctagcatggcaccca
tcagaaaactctattgcttgtgctgccgcaaatagcctgtacatgtattatgcatag
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