Salvia hispanica (chia): 125193629
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Entry
125193629 CDS
T09851
Name
(RefSeq) dnaJ homolog subfamily C GRV2
KO
K09533
DnaJ homolog subfamily C member 13
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125193629
03110 Chaperones and folding catalysts [BR:
shis03110
]
125193629
Spliceosome [BR:
shis03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125193629
Chaperones and folding catalysts [BR:
shis03110
]
Heat shock proteins
HSP40 / DNAJ
125193629
BRITE hierarchy
Motif
Pfam:
RME-8_N
GYF_2
DnaJ
Motif
Other DBs
NCBI-GeneID:
125193629
NCBI-ProteinID:
XP_047947421
LinkDB
All DBs
Position
6:2850092..2865808
Genome browser
AA seq
2381 aa
AA seq
DB search
MDFVSRHAGAPSDNQPPTPSASSAAPPEEPEYLARYAVVKHSWRGRYKRILCISNHSIIT
LDPGTLAVTNSYDVGSDFEGATPIIGRDETSNEFNISVRTDGRGKFKAMKFSSKYRASIL
TELQRIRGNRIAVVGEFPVLHLRRRTSEWIPLKMKVTYIGVEVIDLKTGDLRWCLDFRDM
DSPAILLLSDAFGRKNGDSGGFVLCSLYGRKSKAFQASSGTSNASIISSLTKTANAMVGV
SLVVDNSQSLTITEYVKRRGNDAVGAQETPLGGWSVTRLRTAAHGMLHSSGLSLAIGPKG
GLGDLGDAVFRQLILTKASLVERRPENYEAVIVRPLSSVGALVRFAEEPQMFAVEFNDGC
PIHVYASTSRDSLLAAVLDVLQTEGQCPVPVLPRLTMPGHRIDPPCGRVQLLFPQQPQRP
VADMESSTMHLKHLAAAAKDAVAEGGSIPGSRAKLWRRIREFNACIPFSGVPPTVEVPEV
TLMALITLLPAAPNLPPESLPLPPPSPKAAATVIGFIGCLRRLLSSKNAASHVMSFPAAV
GRIMGLLRNGSEGVAAESIGLIAMLIGGGPGDTAMLSDTKGEQHATIMHTKSVLFAEQSN
LNILVNRIKPTSVSPLLSMTIVEVLEAMICEPHCETTQYTVFVELLRLVAGLRRRLFALF
GHPAESVRETVAVVMRSIAEEDAVAAESMRDAALRDGALLRHLLHAFYLPAGERRDVSRQ
LVALWADSYQPALGLLSRVLPPGLVAYLYTRSNGAEDEDISNQELSLMSKRQRRLLQRRR
NRPVGIPSQGPGLPSVNDTEGTVREQVQQINGHARGLEGYCNLADDSASGYIPSVHPSRI
HHSDNNDLPAAVVPQSDQSSAVASSDNYAAFGPTGANVTSRLDSDIGSSSPHNSGIPAPA
QVVTENAPVGCGRLLLNWPGFWRAFGLDHNRADLIWNERTRQELMEALQAEVHKLDLEKG
RTEDIVPGATSKEAVSGKETMPQISWNYAEFAVRYPSLAKEVCVGQYYLRLLLESGASGR
AKDFPLRDPVAFFRALYHRFLCDADTGLTVDGAVPDEMGSSDDWCDLGRLDGFGGGGGSL
VRELCARAMAIVYEQHYTLVGPFEGTAHVTVLVDRTNDRALRHRLLLLLKVLMKVLSNVE
ACVLVGGCVLAVDLLTVVHEASERTAIPLQSNLIAATAFMEPLKEWMVTDKNNTQVGPVE
KDTVRRFWSKNEIDWTTRCWASGMPDWKRLRDIRELRWAMAVRVPVLTPVQVAEVALSIL
HSMVAAHSDIDDAGEIVTPTPRVKGILSSPRCLPHIAQALLSGEPTIVEAAAALLKAIVT
RNPKAMIRLYSTGAFYFALAYPGSNLHSIAQLFSMTHVHQAFHGGEEAAVSSSLPLAKRS
VLGGLLPESLLYVLERSGPVAFAAAMVSDSDTPEIIWTHKMRAENLICQVLQHLGDFPQK
LSQHCHSLYDYAPMPPVTYPELKDEMWCHRYYLRNLCDEIRFPSWPIVEHVEFLQSLLVM
WREELTRRPMDLSEEEACRILEISIEEVTRDDAPTKRGFGSLEDISKQIENIDEEKLKRQ
YRKLAMKYHPDKNPEGREKFLGVQKAYECLQATMQGLQGPQTWRLLLLLKGQCILYRRYG
TVLMPFKYAGYPMLLNAITVDKDDTNFLSSDRAPLLIAASELVSLTCGSSSLNGEELVRD
GGIPLLATLLSRCMCVVQPTTPSSEPSATIVANIMQTFSVISQFESARTEMLEFSGLVDD
IVHCTELELVPAAVDAALQTIAHVSISSEFQTALLKAGALWYLIPLLLQYDSTAEESDKT
GAHGVGTSVQIAKNSHAVQASNALSRLSGLGSSDSPAPYNEAAADALKALLTPKLASMLK
ENSPKDLLSILNSNLESPEIIWNSSTRAELLNFVEEQSASLRQEGSCELRDSHSFLYEAI
SKELYIGNVYLRVYNDQPDSELTEPESFCLALVDYISHLVHNAPAAINQVNGDVSTESSG
EHPSSDDSSASVDGKPTNREETELIKNLQFGLLSLQHLLTKNPNLASVVSSKEKLKPLFE
CFSLPAASTSNIPQLCLSVLSRLTTFAPCLEAMVADTSSLLTLLQMLHSSPSCREGALHV
LYALASTPELAWAAAKHGGVVFILEVLLPIKEEIPLQQRAAAASLLGKLVGQTMHGPRVA
IALARFLPDGLVSLIRDGPGEAVVLALEQTTETPELVWTPAMAASLSAQLATMASDLYRE
QVKGHLVDWDAAEHASGQQEMRDEPQIDTGYRFCRVGLVEVLLGLLDWRAGGRSELFAQM
KWNESEAAIGRVLAIEVLHAFAAEGAYCTKVRSILDSSSVWNAYKDQRHDLFLPSNAQTS
PAGVAGLIESSSSRLTYAIAAPPSHSTQSKPPTTDSNGSQG
NT seq
7146 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgtcagccgccacgccggcgccccctccgataatcagccgcctactccctcc
gcctcctctgccgcgccgcctgaagagcccgagtatctggcgcggtatgccgtcgttaag
cactcgtggcgcggccgttacaagagaattctgtgcatatccaatcactcgattatcact
ctggatccaggcacgctggccgtgactaattcgtatgatgtcggtagcgattttgaagga
gctaccccgatcattgggagggacgagacttctaatgagtttaatatcagtgtgcggact
gatggccgtgggaagtttaaagcgatgaagttttcttccaagtatagggcgagtatattg
actgaactgcagcggattagagggaacagaatcgctgttgtgggggagttccctgttctt
catttacgaaggcggacctcggaatggatccctcttaaaatgaaagtcacttacattgga
gttgaagtgattgacttgaagactggagatcttcgatggtgtttggacttcagggatatg
gattctccagccatacttcttctctctgacgcttttgggaggaaaaatggtgatagtggc
gggtttgttctatgttctctatatggacggaaatctaaagcatttcaggcttcttcaggg
acttcaaatgcttccattatatcgagtttgactaaaactgcaaacgccatggtcggagtt
tcgttagttgttgataactctcagtcacttactatcacagaatatgtgaaaagaaggggt
aacgatgctgtcggggcccaagaaactcctctcggtggttggtctgttacaaggttgcga
actgctgcacatgggatgctacattcttctggcttaagccttgcaattggaccaaaaggg
ggacttggggacttgggtgacgctgtctttcgtcaacttatcctaacaaaggcctcactt
gttgaaagacgcccagaaaactatgaagctgtaattgttaggcccttatcttcagttggt
gctcttgttcgatttgctgaggagccacagatgttcgctgtggaatttaatgatggatgt
cccattcatgtatatgctagcacgtctcgtgatagcttgctcgcagcagttctggatgtg
ttgcaaactgaaggtcaatgcccagtgcctgttttgccaaggttgacgatgcctggccat
cggattgatcctccttgtggcagagttcagttattatttccccagcagccacagcgacct
gttgctgatatggaatcctcaacaatgcatttaaaacaccttgcagcagctgcaaaagat
gccgtggctgaaggaggctctattcctggttcaagagctaaattgtggcggaggataagg
gaatttaatgcatgcattccatttagtggagttccccctactgttgaagtacctgaggtg
actctgatggcattgatcacattgcttcctgctgctccaaatctccctcccgagtcccta
cccttgccaccaccttcgcctaaagcagctgctactgtaattggtttcattggatgctta
cgcaggttgctctcgtcaaaaaatgctgcttcgcatgtgatgtcatttcctgctgctgtt
ggacgaatcatgggcctgctcagaaatggttctgagggagtagctgctgaatcgataggg
cttattgctatgcttattggtggtggtccaggggatacagctatgttatcagatactaag
ggagaacaacatgcaacaataatgcatacaaaatctgtactatttgctgaacaaagtaac
ctgaatattcttgttaacagaataaaacctacctccgtttcaccattgttatcaatgacc
attgttgaagttctcgaagctatgatatgcgagccacactgtgaaactacccagtacaca
gtgtttgttgaattactgcgcctcgtagctgggctgcgtcgtcgcttgtttgcattattt
ggacatcctgcagaaagtgtccgagaaactgtggctgtagttatgcgttcaatagcagaa
gaagatgctgttgctgctgaatcaatgagagatgccgctttacgtgatggtgcattgctg
cggcatctattacatgcattctaccttcctgctggtgaaagacgtgatgtcagccggcaa
cttgttgctttgtgggcagattcttatcaacctgcccttggattgttgtctagggttcta
ccacctgggctggttgcatatttgtacactagatcaaatggagcagaagatgaagatata
tctaatcaggaactttccttgatgagtaaaagacagaggcgattactccaacgaagaaga
aatcgtcctgttggaatcccctctcaaggcccgggcttgccttctgttaatgacactgaa
ggcaccgtacgagagcaagtacaacagataaatggacatgcaagaggattagaaggatat
tgcaacttggcagatgattcagctagtgggtacattccgtctgttcatccttcgcgaatt
caccacagtgacaacaatgatcttcctgctgcagtggtccctcaaagtgatcagtcatca
gctgttgcttcatctgataattatgcagcatttgggcctactggagcaaatgtcacgagc
agacttgactctgatattggttcatctagcccccataattcaggaatccctgctcctgcc
caggtggttacagagaatgcaccagtggggtgcggaagattgctattaaattggcctggt
ttctggagagcttttggtcttgaccacaatcgtgctgacttgatctggaatgagcgtact
cggcaggagttgatggaagctttgcaggctgaggttcacaaattagatcttgagaaagga
agaactgaggatattgttcctggggctacatccaaggaagctgtgagtgggaaagagacc
atgccacagatatcatggaactatgctgaatttgctgttcggtatcctagcctggcgaag
gaagtttgtgttggtcaatattatctgcgcctgctgcttgagagtggagctagcggtaga
gctaaggactttccactgcgtgacccagttgcatttttcagagcactttatcatcggttc
ctctgtgatgctgacactgggctgacggtagatggcgctgttcctgatgaaatgggttca
tctgatgattggtgtgatttgggaagattagatggttttggcggagggggtggttcctta
gtcagggagctctgtgcaagagcgatggcaattgtatatgagcaacattataccttggta
ggaccattcgaaggcactgcacatgttacagtactagtggatcgaacaaatgatagagct
ctaagacaccggcttcttctccttttaaaggttttgatgaaagttctttcaaatgtggag
gcatgtgttttggttggaggatgtgtgcttgctgttgatttactaaccgttgtccacgag
gcttcagaaagaactgctataccattgcagtctaacttaattgctgctactgctttcatg
gaacccttgaaagaatggatggtcaccgacaagaacaatacccaagttgggcccgttgag
aaggacactgttagaaggttttggtcaaaaaatgaaattgactggacgaccagatgctgg
gcatcagggatgcctgactggaagagactaagagacatccgtgagcttaggtgggcaatg
gctgttcgagttcctgttcttactccagttcaggtagcagaggtggcactttccatatta
cacagcatggtagctgctcattcagatatcgatgatgcaggagagattgttactccgaca
cctagagtaaagggaatcttgtcaagtccacgctgtcttccacatatagctcaggctttg
ctttctggtgaaccaaccatagttgaggctgccgctgctttgcttaaggctatagttacc
aggaatcccaaagccatgataagattatacagtacaggcgccttttattttgccctggca
tatcctggatctaatcttcattcaattgcccagcttttctctatgactcatgttcaccaa
gcttttcatggaggggaggaagctgcagtctcctcttctctacctttagcaaaacgaagt
gttctggggggcctcttacctgagtcattgctctatgtactggaacgtagtgggccagtt
gcttttgcagcagcaatggtctctgattcagacactcctgaaattatttggacacataag
atgcgagcagagaatctaatatgccaggttctgcagcatcttggtgatttccctcagaaa
ttgtcacaacattgccattccttatatgattatgctccaatgcccccagttacatatcca
gagctgaaggatgaaatgtggtgtcaccgttattatcttagaaacttgtgtgatgaaatt
agatttcctagttggccaattgttgaacatgttgagtttttgcaatcattgctggtaatg
tggcgagaggaattaactcgaaggccaatggatctttctgaagaagaagcttgtaggata
ctggagatttcaattgaagaagtgacaagggatgatgcgcctacaaaacgaggatttgga
tcacttgaggacatatcaaagcagatcgagaatattgacgaggagaagctcaaaagacag
tatagaaaacttgcaatgaaatatcacccagacaaaaatcctgaagggagagagaagttt
ctaggagtgcaaaaagcttatgaatgcctgcaggcaactatgcaagggttgcagggacct
caaacttggaggttgttgcttctcttaaagggccaatgtatcctatacaggcgttatggg
actgtcttgatgccgttcaaatatgctgggtatccaatgttgttaaatgccattacagtg
gataaagatgatactaattttctttcttctgatcgagcacctctcttaattgcagcctcg
gagcttgtttcgctgacgtgtggttcctcttcattgaatggtgaagagcttgtgagggat
ggtggaataccacttcttgctactcttctttctcgatgcatgtgtgtggtccaaccgacg
actccttccagtgaaccatctgccactattgttgccaacataatgcaaacattttctgtc
ataagtcagtttgaaagtgccagaacagaaatgcttgagttctctggtttagttgatgac
attgttcattgcacggaacttgagctggtcccagcagctgttgatgctgcgcttcagact
attgctcatgtttctatctcctccgaatttcaaactgctcttttgaaggctggtgccctc
tggtacctaataccgttattgcttcagtatgattcaactgctgaggaatcagataagact
ggtgctcatggtgttggtactagtgttcaaatagcaaaaaattcacatgctgttcaggca
tctaatgccttgtcaaggcttagtggtttgggcagcagtgactctccggcaccctataat
gaagctgcagctgatgcccttaaagctttactgactcctaaacttgcaagcatgctgaaa
gagaactcacccaaagatctcttgtccatattaaactcaaacttggaatctcctgagata
atctggaattcctccactcgagcagaactgttgaattttgtggaggagcagagtgcaagc
ctcagacaagagggctcatgtgaactgagagattcacattcctttctttatgaagcaata
tctaaggaactgtatattggcaatgtatacttgagagtctataatgatcaaccagattct
gaacttactgaacctgagagtttctgtcttgccctagttgattatatatcacatcttgtg
cataatgcacctgccgcaattaatcaagttaatggtgatgtatccactgaatcatctggc
gagcatccctcctctgatgattcttcagcatctgttgatgggaagcctacaaacagggag
gaaactgagttaataaagaatctccaatttggtctgctatctctccagcacttattgacg
aaaaatcccaatttagcttctgttgtgtcctcaaaggaaaagttaaaacccctcttcgag
tgtttttctcttcctgctgcttctacaagcaacattccccagctttgtttaagtgtgcta
tcacgcttgacaacatttgccccttgcttggaggctatggtcgcagatacctcgagtttg
cttacattactacagatgcttcattcatctcccagctgtcgagaaggagctctgcatgtc
ctctacgccttggcaagcacaccagaacttgcatgggcagctgctaagcatggtggggtt
gttttcattctagaggtgctcttgcctataaaagaagagattccgctgcagcaaagagcg
gcagcggcttcattactaggaaagcttgttgggcagacaatgcatgggcccagagttgca
atagccctggctagatttcttcctgatggcctcgtctctctgatcagggatggtcctggt
gaagcagttgtccttgcacttgagcaaacaacagagactccagaacttgtttggacccca
gcaatggcagcatctctatccgcacaacttgcgactatggcttcagatctgtatcgtgaa
caggtgaaagggcatcttgttgattgggatgcagccgaacatgcctctggccaacaggaa
atgagagatgaacctcagattgatacgggatatcgtttctgtagggttggtcttgtcgaa
gtccttcttggccttctcgattggcgagctggaggaagaagtgagctctttgcgcagatg
aaatggaatgagtcagaagcagcgattggcagggttcttgcaatcgaggttttacatgca
tttgcagcagaaggggcgtattgtaccaaagtgcgttctatactagattcctcaagtgta
tggaatgcctataaagatcagaggcatgatctgtttctcccttcaaatgctcaaacttca
cctgcgggagttgccggtctcatcgagagttcatcatccaggcttacgtacgcaatcgca
gcacctccatcacattcaactcaatcaaagccccctaccactgattcaaatggaagccaa
ggctag
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