Salvia hispanica (chia): 125193839
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Entry
125193839 CDS
T09851
Name
(RefSeq) ABC transporter B family member 11-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125193839
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shis02000
]
125193839
04147 Exosome [BR:
shis04147
]
125193839
04090 CD molecules [BR:
shis04090
]
125193839
Enzymes [BR:
shis01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125193839
Transporters [BR:
shis02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125193839
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125193839
CD molecules [BR:
shis04090
]
Proteins
125193839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
Zeta_toxin
AAA_21
RsgA_GTPase
AAA_29
AAA_16
AAA_30
AAA_15
G-alpha
SbcC_Walker_B
PRK
DUF815
AAA_25
MeaB
Motif
Other DBs
NCBI-GeneID:
125193839
NCBI-ProteinID:
XP_047947709
LinkDB
All DBs
Position
6:39465512..39471421
Genome browser
AA seq
1254 aa
AA seq
DB search
MANMESAPSSSIFSVADSTDKVLMLVGTVGAIGHGLSVPLMALIFGSLVNAFEQSHTKNT
VPMVSEVSLEFVYLALGCGLASFLQVSCWTITGERQSSRIRRLYLQAVLRQDIAYFDEKV
STGEIIEKMSSDTNLIHDAIGEKAGKFVQVVTTLLGGFVVAFAKGWLLALVMFSALPLTV
VSSVVVYSLSFKMNSQAQKARNDAANVVHQTIGCIRTVASFNGEKQAVASYKKFLASSYK
FDMFAVLSGGSEFGFHMFTMFCTYAMAVWFGAKMIIHNGYTGGEVYTVLLTMIMGSSSLG
HVLRPLAAFAAGKAAALSMFETINRTPSIDAYDTRGKILNDIRGDIELKFVTFSYPTRPK
ELILDSFSLFIPNGTTVALVGQSGSGKSTIISLIERFYDPVSGEVLIDGTDLREFKLKWI
RSKIGLVSQEPLLFNASIKENIAYGKDEATSDQIRAAAELANAKDFIDKLPQGMDTVVGE
RGVQLSGGQKQRVAIARAIIKDPRILLLDEATSALDADSERVVQEALEKVMMNRTTVIVA
HRLSTIRNANLIVVLHQGKLAEKGTHAELLKDPRGMYSTLIRSQDVNNKLEQNIDDRYIT
GATKYGLESSRSLGMGSNSPGSLSISSSKTAFDVKSSFSTDTSEYHPEVSLYRLAHLNKP
EALVLIAGAVVAVITGAILPVFGLLTAIMIKTFFELPDKMRKDSEFWALMFLILGIVALV
AYSLRSYLFGVAGNKLIKRIREMCFEKLVSMEIEWFDMAKNSSGVISARLSTDAAMIRAL
VGDALAQIVQEIASLLVGFAIAFEACWQLALIVGAMMPLLGLNTYVQMKSAKGFIKEAKL
MNEKASQVANDAVGNMRTVASFCAQEKIMEIYKEKCEGPASSGTKSGLIGGIGFGSSMCF
LYLVYAGSFYAGARLVEDGKTTTANVFCVRLHGSVSLHCAHLHNVVLANTQVFFVLSMVA
TAISTWSAMAPDSGKAKAAAASIFAILDGKSKLDPRDESGITLENIDGEIEFRHVYFSYP
SRPDIQILNDLSLTVSSRKIVGLVGESGSGKSTVISLLQRFYEYDSGHITLDGIEIHKLQ
LKWLRQQMGLVNQEPVLFNDTIRANIAYGKGESPTEAEIIAAAKSANAHEFISGLNRGYD
TVVGERGVQLSGGQKQRVAIARAIIKKPKILLLDEATSALDAESEKIVQEALDRVMVNRS
TIVVAHRLSTIRGADSIAVFKNGCIVEKGNHQSLINIKDGYYSSLVKLHHAALP
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatatggagagtgctccgtcttcatcgatattctcagttgccgattctacagac
aaagttctgatgttggtaggcacagttggtgccattggccatggactgtcagtgcctctc
atggctctgatttttggaagcttagtgaatgctttcgagcaatctcatacgaagaacacc
gtgccaatggtgtctgaggtttcacttgaatttgtgtacttggctctcgggtgtggactt
gcttcttttcttcaagtgtcgtgttggacgatcactggggagaggcagtcttctcgaatt
aggaggctatatttgcaggctgtactgcgacaagatattgcttactttgatgagaaagta
agcaccggagaaataattgaaaagatgtctagtgatacaaatcttattcacgatgccatt
ggagagaaggcggggaagtttgtccaagttgtaacgacgttacttggaggctttgtggtt
gcctttgcaaaagggtggcttcttgcactagtcatgttttcagcacttcctttgacagtc
gtgtcctctgtcgtcgtctactctctcagtttcaagatgaattctcaggctcagaaagcg
cgcaatgatgctgccaacgtagtgcatcaaacaatcggctgtatcagaactgttgcatca
ttcaatggtgagaaacaagctgtggctagctacaagaagtttcttgctagctcctacaaa
ttcgacatgtttgcagttttgagtggcggatcagaattcggattccacatgtttaccatg
ttctgcacttatgctatggctgtttggtttggtgccaaaatgatcatacataatggttat
actggaggggaagtgtatacagtgctcctcacaatgataatgggatcttcttctctgggc
catgtgttgcgtccactagctgcatttgcagcaggcaaagcagcagctttaagtatgttt
gagacgataaataggacaccgagcattgatgcgtatgacacaagaggaaaaatattgaac
gacattcgtggagacatagagttgaagtttgtcactttcagctatccgacaagaccaaaa
gagctaatattagattcgttttctctgtttattcccaatggaacgactgtagctttggtc
gggcagagtggaagcgggaagtctactattattagtctaatagagcggttttatgatcca
gtttcgggtgaggtattgattgatggaactgatctacgagaattcaagctcaagtggatt
agatcaaagataggcctagttagccaggagccactacttttcaatgccagcatcaaggaa
aatattgcgtatggcaaagacgaagcgacttcagaccagattagagcagcagcagagttg
gcaaacgcaaaagatttcattgataagcttcctcaggggatggataccgtggttggggag
cgtggcgtgcagctttctggtggtcagaaacaaagagttgcaatagctagagcaatcata
aaggatcccagaattctacttctagatgaggcaacgagcgcgctagatgcagactctgaa
agagtcgtacaagaggcgttggaaaaagtcatgatgaatcgaacgactgtcattgttgca
catcgcttgagcactattagaaatgctaatttaattgttgttcttcaccaaggaaaactg
gctgagaaaggtacacatgccgaactactcaaggatcctcgcgggatgtattctactctg
atacgctctcaagacgtaaacaacaaattggagcaaaacattgatgacagatacataaca
ggtgccacaaaatatggcttagagagttcgcgatcattgggaatgggaagcaacagccct
ggttcattgtcaattagttcctcgaaaactgcatttgatgttaagtcctccttctctact
gatacatcagaataccatccggaagtctcactttatcgccttgctcatctcaacaagcca
gaggcactagtgctaatagcaggagctgtagttgctgtcataactggggcaatactgccc
gtttttggcttactaaccgctatcatgatcaagacatttttcgagttgcctgataaaatg
aggaaggattcagaattctgggctttgatgtttctcattcttggaatagtagcactggtt
gcatattcattaaggtcatacttgtttggcgtggctgggaataagctgattaagcgaatc
agagaaatgtgcttcgagaagctggttagcatggagatagaatggtttgatatggctaag
aactccagcggcgtgatcagtgcaaggctctcgactgatgcagctatgatccgtgctctc
gttggagatgcattggcgcagattgtgcaagaaatcgcctcacttctagttgggttcgct
atagcttttgaagcatgttggcagttggcacttatagttggtgcaatgatgcctctctta
ggacttaacacctatgtacagatgaagtctgcaaaaggattcatcaaggaagcaaagttg
atgaatgagaaagcgagtcaagtagcgaatgatgctgttggtaatatgagaacggtagct
tcgttttgtgctcaagaaaagatcatggagatttacaaggagaaatgtgaagggccagct
tcaagtgggacaaaatcaggattaattggtggaattggatttggttcatctatgtgcttt
ctatacttggtttatgcaggcagcttctatgcaggtgctcggctcgttgaggatgggaaa
acgaccacggctaatgtattttgtgtacgtttacatggctctgtctcattacattgcgct
catttgcataatgtagttcttgcaaacacgcaggttttcttcgttctatcaatggtggcc
acagcaatatccacttggagtgccatggctccggattcaggcaaagcaaaggctgcagcc
gcctccatatttgccattcttgatggcaaatccaagcttgatcctagagacgagtcaggg
atcactctcgaaaatattgacggagaaattgaattcagacatgtttacttcagctatcca
agtaggccagacattcagattttaaatgatctttctttgacggtcagcagtcgcaagata
gttggtctagttggggagagtggaagtggtaaatcaactgtgatctcattgctccaaaga
ttttatgaatatgactctggtcacatcacacttgatgggattgagatacataagctccag
ctgaaatggctaaggcagcagatggggctggtgaaccaagagccggtcttgttcaacgac
acaatcagagcaaacatcgcttatggcaaaggagagtccccgaccgaggctgagatcata
gctgcagcaaaatcagccaatgcacatgaatttatcagtgggctgaaccggggatacgac
acggtagtaggagagagaggggttcagctatcgggcgggcagaagcagcgcgtggcaatt
gcaagagcgataatcaagaagcccaagatacttctactagatgaggcaacgagcgcgttg
gatgcagagtccgagaagatagttcaagaggctctggatagagtgatggtgaatagaagc
acaattgtagtagcacataggctatctacaatcaggggagcagactccattgcggtgttc
aagaatggatgcattgtggagaaaggaaatcaccaaagcttgatcaatatcaaagatggc
tattactcctctcttgtaaaacttcaccatgctgcattgccttaa
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integrated database retrieval system
