Salvia hispanica (chia): 125197156
Help
Entry
125197156 CDS
T09851
Name
(RefSeq) 3-isopropylmalate dehydratase large subunit, chloroplastic-like
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00290
Valine, leucine and isoleucine biosynthesis
shis00660
C5-Branched dibasic acid metabolism
shis00966
Glucosinolate biosynthesis
shis01100
Metabolic pathways
shis01110
Biosynthesis of secondary metabolites
shis01210
2-Oxocarboxylic acid metabolism
shis01230
Biosynthesis of amino acids
Module
shis_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
125197156
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
125197156
09110 Biosynthesis of other secondary metabolites
00966 Glucosinolate biosynthesis
125197156
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
125197156
4.2.1.35 (R)-2-methylmalate dehydratase
125197156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-GeneID:
125197156
NCBI-ProteinID:
XP_047951821
LinkDB
All DBs
Position
6:complement(41558951..41561848)
Genome browser
AA seq
448 aa
AA seq
DB search
MTMTEKIVARASEKSQLSPSDNVWANVDVLMTHDVCGPGAFGIFKREFGENAKVWDREKV
IVIPDHYIFTTDELANHDVNTLREFCTEQDIKYFYDIKDVADFKANPDYKGVCHVALAQE
GHCSGEILLGTDSHTCTAGAFGQFATGIGITDAGFVLGTGKLLLKVPPTLRFVLDGEMPD
CVLAKDLILQIIGEISVAGARYKSMEFVGSTVESLTMEDRMTLCNMVIEAGGKNGIVPAD
VTTFKYLQDKTLVPYEPVYSDGQARFLLEYSFDISKLEPLVAKPHSPDNRALARECKDVK
IDRVYIGSCTGGKTEDFMAAAKVFLASGKKVKVPIILVPATQKVWMDIYSLPLSESDGKT
CSQIFEEVGCDTPVSPTCGACMGGPRDTYARINEPLEILCVQVCVSTTNWNFPGRMGHKE
GQVYLASPYTAAASALTGLVTDPREFLK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgacagaaaagatagtggcaagagcttcagaaaaaagtcagttgagccctagt
gacaatgtatgggccaatgtggatgttctgatgactcatgacgtatgtggcccgggcgcc
tttggaattttcaagagagagtttggagaaaatgcaaaggtgtgggatcgcgaaaaagtt
atagtcattccggatcattacatattcacaacggatgagctagccaaccatgatgtcaac
accttgagggaattttgtaccgaacaagatatcaagtacttctatgatattaaggatgtt
gcagatttcaaggcgaatccggattacaaaggcgtttgccacgtcgctcttgcccaagaa
ggacactgcagtggagagatcttgctgggtacagactcccacacatgtactgctggagca
tttggtcaattcgctacgggaattggaattactgatgcaggttttgtgctcggtactgga
aagcttttgcttaaggtgcccccgactctgagattcgtattggatggtgaaatgcctgat
tgtgtgcttgcaaaagacttgattctgcaaattattggcgaaatatctgtggctggtgca
agatataaatccatggaatttgttggctctactgttgaaagcttgactatggaagacaga
atgacattgtgcaacatggtcattgaagctgggggaaagaatggcatcgtccctgctgat
gttacaaccttcaagtatcttcaggacaagacattggtgccttatgaaccagtttacagt
gatgggcaagcaagatttctcttagaatatagctttgacatctcaaagttggagcccttg
gtggccaagcctcactcacccgacaaccgggcattagcaagagagtgcaaagacgtgaaa
atcgacagagtgtacataggatcttgtaccggtgggaagacagaggacttcatggcagct
gccaaagttttccttgcttctggaaaaaaggtcaaagtcccaataattcttgttcctgca
actcagaaggtctggatggatatatatagccttccactctcagaatccgatggaaaaact
tgctcacagatattcgaagaagttggttgtgatactccggtaagccccacctgtggtgct
tgcatgggaggacctagagacacctatgcacgcatcaacgagcctctagaaatactttgt
gttcaggtatgtgtttcaacgacgaattggaatttcccaggtcgaatggggcataaagaa
gggcaggtttacctagcttccccgtatacagctgctgcatctgcactaactggacttgtc
actgatcctagagaatttttaaagtaa
DBGET
integrated database retrieval system
