Salvia hispanica (chia): 125201022
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Entry
125201022 CDS
T09851
Name
(RefSeq) ABC transporter B family member 1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125201022
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shis02000
]
125201022
04147 Exosome [BR:
shis04147
]
125201022
04090 CD molecules [BR:
shis04090
]
125201022
Enzymes [BR:
shis01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125201022
Transporters [BR:
shis02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125201022
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125201022
CD molecules [BR:
shis04090
]
Proteins
125201022
BRITE hierarchy
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
ABC_ATPase
AAA_22
AAA_30
Zeta_toxin
AAA_21
RsgA_GTPase
AAA_15
DUF87
nSTAND1
AAA_25
DUF815
SbcC_Walker_B
APS_kinase
PRK
AGT
DUF1360
Motif
Other DBs
NCBI-GeneID:
125201022
NCBI-ProteinID:
XP_047954850
LinkDB
All DBs
Position
1:32128091..32133831
Genome browser
AA seq
1311 aa
AA seq
DB search
MRQEDGGEIKMQEQWRWSDLQGVELVVSTSPPPNLNASSDASSSAPQIPPPPPSMDPEKP
GPPPPSVAFRELFRFADRLDYTLMTIGTIGAIVHGSSLPLFLRFFADLVNSFGSNANNVD
KMSQEVLKYAFYFLVVGAAIWASSWAEISCWMWSGERQSTKMRIRYLEAALNQDIQFFDT
EIRTSDVVFAINTDAVMVQDAISEKLGNFLHYMATFVSGFVVGFSAVWQLALVTLAVVPL
IAVIGAIHTITLAKLSGKSQEALSQAGNIAEQTLVQIRTVLAFVGESRALQDYSAALKVS
QRIGYKSGFSKGMGLGATYFTVFCCYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLA
LGQSAPSMAAFAKARVAAAKIFRMIDHKPAVERNSESGVELESITGQMELRNVDFAYPSR
PENLVLNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPASGQVVIDGHDIKTLKLR
WLRQQIGLVSQEPALFATTIKENILLGRPDASLVEVEEASRVANAHSFIVKLPDGYDTQV
GERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLV
IAHRLSTIRKADLVAVLQQGSVSEIGPHDELIAKGENGLYAKLIRMQEAAHEAAVNSARK
SSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDLSMSIDAAYPSYRAEKLAFKE
QASSFLRLAKMNSPEWGYALVGSIGSVVCGSLSALFAYVLSAVLSVYYNPDHAYMIRQIG
KYCYLLIGVSSAALIFNTLQHLFWDVVGENLTKRVREKMLAAVLKNEIAWFDEEENESSR
VAARLALDANNVRSAIGDRISVIMQNSALMLVACTAGFVLQWRLALVLIAVFPVVVAATV
LQKMFMTGFSGDLEAAHAKATQLAGEAVSNVRTVAAFNSETKMVGLFISSLEPPLRRCFW
KGQIAGTGYGLAQFALYASYALGLWYASWLVKHGISDFSSTIRVFMVLMVSANGAAETLT
LAPDFIKGGRAMRSVFALLDRRTQIEPDDPEGVPTPDSIRGEIELKHVDFYYPSRPHVSV
LGDLNLRARAGKTLALVGPSGSGKSSILALILRFYEPSSGRILVDGKDIRKYNLKSLRRH
IALVQQEPCLFATTIYDNIAYGREPAPTESEVVEAATLANAHRFISALPDGYKTHVGERG
CQLSGGQKQRIAIARAFIRRAAVMLLDEATSALDTESEKCVQEALGRACAGKTTVVVAHR
LSTIRNAHVIAVLDEGKVAEQGSHSHLLKNYADGIYARMTQLQRLTTNPTT
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgagacaagaagatggcggggagataaagatgcaggagcaatggagatggtccgacctt
caaggcgtcgagctcgtcgtctccacctctccgccgcccaacctcaacgccagctccgac
gcctcatcgtcagctccacagataccaccgccgccgccctcaatggacccggaaaaaccc
ggccctccgccgccctccgtcgcgttccgggagctcttccgcttcgccgaccgcctcgat
tacacgctgatgacgattggcacaattggcgcgattgtccacggcagctccctgcctctg
tttctcagattcttcgccgatcttgtgaattccttcggctccaatgccaataatgtcgat
aagatgtcgcaggaggtgctcaagtatgcattttactttcttgtagttggagctgctatt
tgggcatcttcatgggcagagatatcatgttggatgtggagtggagagaggcaatcaaca
aagatgcggatcagatacttggaggctgctcttaaccaagacattcagtttttcgacacc
gagattcggacgtccgacgtcgttttcgccatcaacactgatgctgtgatggttcaagat
gctattagtgagaagttggggaatttcttgcattacatggcaacctttgtgtctggattt
gtggtgggattctctgcagtgtggcagctagctctggtcactcttgctgtggttcctctc
atagctgtgattggagccattcacacaatcacactggctaaactctctggcaaaagccaa
gaagctctgtcacaagctgggaacatcgctgaacagacacttgtccaaattcggacggta
ttggcattcgtgggtgaatcgagggcgttgcaggactactcagcggccctcaaggtgtcc
caaaggatcggttacaagagtggattttcaaaggggatgggattaggagctacttatttc
actgtgttttgttgctatgctcttctcctgtggtacggaggctatttggttaggcaccat
tacacaaatggaggtctagcaattgcgacaatgtttgcagtcatgattggcgggctggct
ttaggccagtctgctccaagcatggctgcatttgccaaggcaagagttgcagctgctaaa
atcttccgtatgatcgaccacaaaccagctgttgaaagaaacagcgaatccggagtcgag
ttggagtctataacagggcagatggagcttagaaatgtcgattttgcctacccttcacgg
ccggagaatctagtccttaacaacttctctcttactgttccggctgggaagactatcgcc
ttggttggcagcagtggatccgggaagagcacggtggtgtcactcattgagagattctat
gaccctgcctccggccaagttgtgattgatgggcatgatataaagacattaaagttgaga
tggttgaggcagcaaattgggctggtgagccaagaaccggcactctttgccaccacaatc
aaagaaaacatactgttgggaaggccagacgctagtttagtcgaagtagaagaagcgtct
agagtcgctaacgcacattcatttatcgtcaagcttccagatggctacgatactcaggtg
ggggagagggggctgcagctttctggtggacaaaagcagagaatagctatagcaagggca
atgctcaagaatccagccatccttctattggatgaggcaactagtgcattagattctgaa
tcggagaagctggtacaagaagcgctagatcgtttcatgattgggaggactactctagtg
atcgctcatcgcctctccaccatccggaaagctgacctcgtggccgtgctgcagcagggt
agcgtgtctgaaatcgggccacatgacgagctcattgccaaaggtgaaaacggtctctat
gcaaagctcatcagaatgcaagaagcagctcatgaagctgctgtcaacagtgccaggaag
agtagtgcaaggccttcaagtgcaagaaactctgtgagctctcctatcatcactaggaat
tcgtcatatggcagatcgccttactcccgaagattgtcggacttctccacctcagactta
agcatgtcgattgacgcagcatatcccagctacagggcggagaaacttgcattcaaagag
caagcaagctcattcttgaggctagcaaagatgaattcgcctgagtggggctacgccttg
gttggctcgattgggtccgtggtctgtggctcgctgagcgcactgttcgcatacgtgctg
agcgccgtgcttagcgtctactacaatccggatcatgcctacatgataaggcagattgga
aaatattgctaccttctgataggggtgtcatctgcagcactgatattcaacacattgcag
catcttttctgggacgtggtgggggagaacttgaccaaacgcgttagggagaagatgctg
gctgccgtgctaaagaatgagattgcgtggtttgatgaggaagagaatgagagctctaga
gttgcagcacggctggctctagacgccaacaatgttagatcagccattggtgacaggatc
tctgtgatcatgcagaactctgcccttatgcttgtggcctgcactgccggctttgtgctg
caatggcgccttgccctcgtcctcattgccgtcttccctgttgtcgttgcagccacagtg
ttacagaaaatgtttatgactggattttctggagatttagaggcagctcatgccaaggcc
acacagctagcaggggaagcagtgagcaatgtgagaactgtggctgcattcaactcagag
acgaagatggtgggcctattcattagcagcctcgagccgcctctgcgccgctgcttctgg
aagggccagatagccggcactggctacgggctggcccagttcgccctctatgcctcgtac
gccctcggcctctggtacgcatcatggctcgtcaagcacggcatctccgacttctcgagc
accatccgtgtcttcatggtcctcatggtctccgccaacggggccgcggagaccctcaca
cttgccccagacttcatcaagggtggacgtgcaatgcggtctgtcttcgctctcctggac
cgccggactcaaattgagccagacgatccggagggcgtccccaccccggactccatccgg
ggtgagatcgagctgaagcacgtggacttctactaccccagccggccccacgtctctgtc
ctcggggacctcaacctccgcgcccgggcaggcaagacgctcgccctcgtcggccccagc
ggctcaggaaaaagctccatcctcgccctcatcctccggttctacgagccttcctcaggc
cgcatcctcgttgacgggaaggacatccggaagtacaacctgaagtcgctgaggcgccac
atagccctggtgcagcaagagccgtgcctcttcgccaccacgatctacgacaacatcgcg
tacggccgagagccggctcccacggagtcggaggtggttgaggcagccacattggccaac
gcgcacaggttcatatcagcgctgcccgacggctacaagacgcacgtaggggagcgaggg
tgccagctctcgggcgggcagaagcagcggatcgccatcgcacgagccttcatcaggagg
gctgcggtgatgctgctggacgaggccacgagcgcactcgacactgagtcggagaagtgc
gtgcaggaggcactcgggcgcgcctgcgcggggaagacaacggtcgtcgtcgcgcatagg
ctttcgactattagaaatgcgcacgtgatcgcagttcttgatgaggggaaggtggctgag
caaggctcgcattcgcatctcttgaaaaactatgcagatgggatatatgcgcggatgaca
cagctgcagaggctcaccactaatccaacaacctag
DBGET
integrated database retrieval system
