Salvia hispanica (chia): 125205718
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Entry
125205718 CDS
T09851
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125205718
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shis01009
]
125205718
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125205718
03036 Chromosome and associated proteins [BR:
shis03036
]
125205718
Protein phosphatases and associated proteins [BR:
shis01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125205718
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125205718
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125205718
BRITE hierarchy
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EZ
PDS5
SCD
Cnd1
CLASP_N
TAF6_C
Motif
Other DBs
NCBI-GeneID:
125205718
NCBI-ProteinID:
XP_047960749
LinkDB
All DBs
Position
2:complement(29830059..29837121)
Genome browser
AA seq
586 aa
AA seq
DB search
MAMVEEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFVPYVGGVEHAQVLLLPLETLCTVEETCVRDKAVESLCRIGTQMKGS
DLVDSFVPLVKRLAAGEWFTARVSACGLFHIAYPSASEMLKTELRSIYSQLCQDDMPMVR
RAAAGNLGKFAATVEASYLKSDIMSMFEDLTQDDQDSVRLLAVEGCAALGKLLDPQDCVG
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRILRDNEAEVRIAA
AGKVTKFCRIVNPDLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIDQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDEKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIIPQV
LDMVNNPHYLYRMTVLRSIALLAPVMGSEITCSHLLPVMVTASKDRVPNIKFNVAKVLQS
MIPIVDHSVVEKSIRPSLVELAEDPDVDVRFFANQALQSIDHVMMS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggtggaggagcctctgtatccaatagcggtgctcatagatgagctcaagaat
gatgacattcaactccggctgaactctatacgaagactatccaccattgcacgtgcactg
ggggaggaaaggactcgaaaagagttgataccatttctgagtgagaacaatgacgatgat
gatgaggtgctccttgctatggctgaagaattgggtgttttcgttccatatgttggaggg
gtggagcatgcacaggttttgctcctcccactggaaaccctttgtactgtggaagagacc
tgtgtgagggataaagctgtagaatcattgtgcagaatcggaacacagatgaaaggaagt
gatttggttgattcttttgttccacttgtgaagaggctggcagctggtgagtggtttaca
gctcgtgtttcggcttgtggactatttcatattgcttaccctagtgcctcagagatgcta
aagacagaattaagatcaatttatagccagttgtgtcaagatgatatgcctatggtcaga
agggctgctgcgggaaatttgggaaaatttgctgccactgtggaagcttcgtatctcaaa
agcgacatcatgtccatgttcgaggatcttacgcaggatgatcaggattctgttcgcttg
ctagctgttgagggctgtgctgctctcgggaagttgttggaccctcaagattgtgttgga
cacattctccccgtcattgtcaacttctcccaggataagtcatggcgtgtccgctacatg
gttgccaatcaattgtatgagctatgtgaggctgtgggacctgaacctactaggacggat
ttggttcctgcatatgtccgaatacttcgagataatgaagcagaagtccgaattgcagct
gcgggaaaagtgactaagttttgtcgaattgttaaccccgatctggctatccaacatatt
cttccctgtgtaaaggagttgtcatctgattcttcacagcatgtaaggtctgctttggca
tccgtcattatggggatggctcctgttttagggaaggatgcaacaattgatcaacttctt
cccatatttctttcacttttgaaagatgagtttcctgatgttcgccttaatatcatcagc
aagctagatcaagtcaatcaggttattggaattgatttactctcgcaatctctattacca
gctattgttgagctggcagaggataggcactggagagttcggctcgccatcatagaatat
atacctttattggctagtcaactgggtgtaggattttttgatgaaaagctaggtgcccta
tgcatgcagtggctacaggacaaggtgtactccattagagatgctgcagctaataatctg
aaacgtctggcagaagaatttggtccagagtgggcaatgcagcatatcattcctcaggtt
ctggatatggtaaacaatccccattatttgtaccggatgactgttcttcgttcaattgcc
ttgcttgctcccgttatgggttctgagatcacatgttctcacttgctgcctgttatggtc
accgcatcaaaggacagagtacccaacattaagtttaacgttgcaaaggtgctgcagtca
atgatccccatcgttgatcattctgtggtggagaaatcgatacgccccagcttagtagag
cttgctgaggaccctgatgtagatgtccgtttttttgccaatcaagcacttcagtcaatt
gatcatgtgatgatgagctaa
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