Salvia hispanica (chia): 125205758
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Entry
125205758 CDS
T09851
Name
(RefSeq) trafficking protein particle complex subunit 8-like
KO
K20305
trafficking protein particle complex subunit 8
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125205758
Membrane trafficking [BR:
shis04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
125205758
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
125205758
NCBI-ProteinID:
XP_047960820
LinkDB
All DBs
Position
2:complement(6383693..6397033)
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AA seq
1293 aa
AA seq
DB search
MVDPANTKLGRMLLDQISPAVMVLRTPLVEDSCRRNHLSLIEMLSPYSTFNNIDVPVRTA
SDQPYRLRKFKLRLFYNSDIRQRSTEAAKERLKQVITHAGDKEISDLCSPEAEIESVITM
SAQELVPSWFQNFNKELIDAAAFSEHEAFDHPVACLVAVSTKDKDPIGKFVDLFNTTQLP
HLLNDGSMDPKILKYYLLVHDNQEGMQEKATGILAEMRSTFGASDCRLLCINSSVDGTEE
HQQNSWASHENSASNEKQFGCFLNKDDIEELRNTMHDFSSKHIIPLMELKIRVLNQQVSA
TRKGFRNQIKNLWWRKGKDDVPENPSAPMYTFNSTESQIRVLGDYAFMLRDYELALSNYR
LISTDYKLDKALKHYAGVQEMMGLAYFMLDQSRKDAEYCMENAFTTYAKIGSSCGRNVTR
CGIWWAEMLKARDQYKDAAGVYFRISGEEPLNSAVMLEQAAYCFLMSTPAMLRKYGFHLV
LSGDLYKKCDQIKHAVRTYKGALSVFKGTAWSHIRDHVHFHIGKWYAILGMFDEGIKHVL
EVLACGHQAKLTQELFLSEFFQIIQETGKIFEVLRLQLPVINFPSIKVVFEDHRTYASPA
AANVEESLWQALEEDMTPSVAGLKSNWLDLQSKILPKKYKESNVCIAGEAIKVEVSFRNP
LQIPISVSNVSLICKHSTECDKIDPASNGSLDEDKNDTGLRTVSVTGETSTDASFFDLSE
VNISMQSGETVLVQLTVTPKVEGTLKLVGVRWKLSGSVIGICNFQSDIVRKKVAKGKRKP
KKSLKDNLEFLVIKSLPRLEGTIHNLPQTVYTGDLRRLTMELRNPSKTPVKNLKMKINHP
RFLDIADQEVMNLEFPTYLKKQAISSRSCTTLDASKTAKTVFMFPENIASSWQTPIKWPL
WFRAAASGSISLCITIYYETEDVSSIIKYRTLRMHYNVEVLPSLEVSYRISPSPSRLHEF
LVRMDATNRTSSQNFQVHQLSCVVDQWELALLQPMQPIGPNLSLGFLMAGQSLSCFFRLK
NCKTRGSTEDKMSFAKGIADVRLVDSESSGLFDTSVSPFDLFHHQERLHQERHDKGDGNT
VDFILIAESQDDSDAEPPRTAAEILSHYACHCRVGSSSPVWWSMDGPRSVNHDFSSGFCE
INLNMTVYNSLEDAVSVRINTLDSLPRSNSITNTASVSGYEYGWHDASHLTDAKVTPDSM
GGRVGKALSPESVSPFIWSGSCSTRINLEPLSSAEVPLQISVFCQGTFDLSNYSLQWNLL
PGDGGDDGNESRVRSGSCHGRPYHITVLQKEQS
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggtggatccggcgaacacgaagctcggcaggatgctgttggaccagatcagcccggct
gtgatggtgctccgcacgccgctcgtggaggattcctgccggagaaatcatttatccctg
attgaaatgttgtccccctacagcactttcaataacatcgacgttccagtcaggacggct
agtgatcagccgtacagattgaggaaattcaaattgagattgttttataattcggatatt
cggcagcggagtactgaggctgcaaaggagaggttaaaacaagtaatcactcatgcggga
gataaagagatatccgatttgtgttcacctgaagcagaaattgagtctgtaattacgatg
tcagcgcaggagttagtgccatcatggtttcagaattttaacaaagagcttatcgatgct
gctgccttctcagaacatgaagcttttgatcatcctgtggcttgccttgttgccgtctct
acaaaggataaagatcccataggaaaatttgttgaccttttcaacacaactcagttgcct
catcttctgaacgatggctccatggatcctaagattctgaagtattacttgctggtacat
gataatcaagaaggcatgcaggaaaaagctactggaattctggcagaaatgaggagtaca
tttggtgcaagtgattgtcgtctcttgtgtataaactcttctgttgacggcacggaagaa
catcaacaaaattcatgggcatctcatgaaaatagtgcttcaaatgaaaaacagttcggt
tgcttcctcaacaaggatgatatagaagagctgagaaataccatgcacgatttctcatct
aaacatataatccctcttatggagctgaaaattcgtgttcttaaccagcaggtttcagca
acaaggaagggttttagaaaccagataaaaaacttatggtggagaaaagggaaagacgat
gtacctgagaatcctagtgcacctatgtacacctttaactcgacagaatctcagatacga
gtgttgggtgactatgctttcatgttgcgagactatgagctggcattatcgaattatcga
cttatttctactgattacaaacttgataaagctttgaagcattatgctggtgttcaggag
atgatgggactggcttattttatgttggatcagtcaagaaaagatgctgagtactgcatg
gaaaatgcatttaccacatatgcgaaaattggttcatcatgtgggcggaacgtcacacgc
tgcggaatttggtgggctgagatgttaaaggctagagatcagtacaaagacgctgctggt
gtctacttccgaatctctggtgaggaacccttgaattctgcggtgatgcttgagcaagcc
gcgtactgcttcttgatgtctacaccagccatgttaaggaaatatgggtttcaccttgtt
ctttctggcgatctctacaagaaatgtgatcagataaaacatgcagtgagaacatacaaa
ggtgccctttctgtctttaaaggcacagcttggagccacatcagggatcatgtccatttc
catattggaaagtggtatgcaatacttggaatgttcgatgagggtatcaaacatgtgtta
gaggtcttggcctgtggtcatcaagccaagctcactcaagagttgttcctgagtgaattt
tttcaaattattcaggaaacagggaaaatatttgaggtgttgaggcttcagttgcctgtg
ataaactttccttcaatcaaagtcgtgtttgaagatcatcgcacttatgcatctcctgca
gctgccaatgttgaggaaagcttgtggcaggcgctggaggaggacatgactccatcggtc
gcagggttgaagagtaactggcttgatttacaatcaaagattttaccaaagaagtacaaa
gaatcaaacgtctgcattgctggagaggctatcaaggtggaagttagtttcaggaaccct
cttcagatccctatatcagtttcaaatgtttctctgatatgcaagcattcaacagaatgt
gataaaattgacccagcctcgaatggatctttagatgaagataagaatgacacaggattg
agaactgtctcagttactggggagactagcacagatgcatcgtttttcgatttatcagaa
gtcaacatttcaatgcaaagtggagaaaccgtattggttcagctaacagtcactcccaaa
gtagagggcactttaaaattagttggcgttcggtggaaactctctggttcggtaattgga
atttgtaactttcagtcagatattgtcagaaagaaagttgctaaagggaaaagaaagcca
aaaaagtcactgaaagataaccttgagttcttggtgataaagagtctaccaaggcttgag
ggtaccattcacaacttacctcagacagtttatactggagatcttcgacgtcttaccatg
gagttgaggaatccatcaaaaactcctgtgaagaacttgaagatgaagatcaatcatcca
agatttctagacattgcagatcaggaagttatgaacttggaattccctacttatctgaaa
aaacaggcaatttcatcacgaagctgcactaccttagatgcatccaagacagcaaaaact
gtatttatgttccccgagaacatagcaagttcttggcaaacacccattaagtggcccctt
tggtttagggctgctgcttctggaagcatttcactgtgtataacaatatattacgaaaca
gaagatgtgtcatcaatcataaaatatcgaactttgcgcatgcattacaatgtggaggtg
ctgccatctctggaagtgtcatatcgaatcagcccctctccatctcgattgcacgagttc
cttgttcgtatggatgccaccaacaggaccagttcacagaatttccaggtgcatcagtta
tcatgtgttgtggaccagtgggaacttgcactgctgcagccaatgcagccaataggacct
aacttatccttgggatttttgatggctggtcagtcactgtcatgctttttcaggctaaag
aattgcaaaactcgaggaagtactgaagataaaatgtcttttgccaagggaatagcagat
gtgagacttgttgatagcgagtccagtggattgtttgatacatctgtatcaccttttgat
ctttttcatcatcaagaaagattgcatcaagaaaggcatgacaagggtgatgggaacact
gttgatttcatcttgatagccgagtcacaggatgatagtgatgctgagccaccaagaacc
gctgcagaaattctctctcactacgcgtgccactgcagagttggaagtagcagcccggta
tggtggtcaatggatggtcctcggtcagtgaaccatgacttttcatctggtttctgtgag
ataaatctgaatatgactgtatacaactccttagaagatgctgtatcagttcgaattaac
acccttgattccttacctcggtcgaactcaatcaccaacactgcttctgtatctgggtac
gaatatggttggcacgatgcatctcatttaactgatgctaaagtaacacctgattccatg
gggggccgagttgggaaggctctatcacctgagagcgtttcaccattcatttggtccgga
tcatgttcaacgcggatcaatcttgagccgctgtcttctgctgaagtacctctccagatt
tctgtgttttgccaaggtacgtttgacttatcaaactactcgttgcagtggaatttactg
ccaggtgacggaggagacgatggaaacgaatcaagagtgcgatctggttcttgtcatggc
cgcccttaccatattacagtgctgcaaaaagaacaaagctga
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integrated database retrieval system
