Salvia hispanica (chia): 125210870
Help
Entry
125210870 CDS
T09851
Name
(RefSeq) tRNase Z TRZ2, chloroplastic
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shis03016
]
125210870
Enzymes [BR:
shis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
125210870
Transfer RNA biogenesis [BR:
shis03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
125210870
Prokaryotic type
125210870
BRITE hierarchy
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
125210870
NCBI-ProteinID:
XP_047966439
LinkDB
All DBs
Position
3:complement(46985442..46989270)
Genome browser
AA seq
376 aa
AA seq
DB search
MISSTVKLITKTLFAFPLKTNYQMISLNPATSNLLNFSQFHQFPPPSLRHHLPIQPRTVN
AAVQSGGGGGSGFLTAIGRAIEEEEYRKARAEVHKKSIDLDGYSIEGLSIGGHETCVIVP
ELKAAFDIGRCPAKAVQQNFLFITHAHLDHIGGLPMYIATRGLYSLKPPTVFVPPSIMGD
VEQLINIHRNMGQVELNVDLVPLDVGETYEMRNDLVVRPFRTHHVITSQGYVIYSVRKKL
RKQYTHLKGKQIEKIKKSGVEITDTILCPEVAFTGDTTSDFYLDPRSADALRAKILITEA
TFLDESVSVEHAREHGHTHIDEIMENAQWIRNKTIVLTHFSSRYHLEDIRQAVSKLQSKV
SAKVMSLTEGFKSLHA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgatatcttcaacagttaaactgataacaaaaacactgtttgcgttccctctcaaaaca
aactaccaaatgatatcactaaacccagcaacctcaaatttgctcaatttcagtcaattt
caccaatttccaccaccatccctcaggcatcaccttccaattcaacctcgaaccgtcaat
gcggcggtgcagagcggcggcggcggtggttcaggttttttgacagcaattgggcgtgca
atagaggaagaagagtacagaaaggccagggctgaggtccacaaaaaaagtatcgattta
gacggatattccatcgaagggctgtcgattggtggccacgaaacttgcgttattgtgcct
gaattgaaggcggccttcgatatcgggaggtgccccgccaaggctgtgcagcagaatttt
ctcttcattacacatgctcatctcgaccacattggtgggctgccgatgtatattgcaacc
cgtggtctttacagcttaaagccccctactgtatttgttcctccaagcataatgggagat
gtagaacaattaattaacattcacagaaacatgggtcaggtggaactaaatgttgatttg
gttcctctggatgtaggggaaacatatgaaatgcggaatgatcttgttgtacgaccattc
agaacgcaccatgttataaccagccagggttatgtgatttactcagtcaggaagaaactg
agaaaacagtacacacatttaaaaggaaaacaaattgagaaaattaagaagtctggagtt
gagatcacagatactatcttgtgccctgaggtggcctttacaggagataccacatcagac
ttttaccttgatccacgcagtgctgatgccttgagggccaagattctcataactgaggct
acatttctggatgaaagtgtcagcgttgagcatgcacgagagcacggccatactcatatt
gatgagatcatggaaaatgcacaatggattcggaacaaaaccatagtgctgactcatttc
tcatctcgctaccatctagaggacatccggcaagctgtgtcgaaattgcagtcgaaggtg
tcagctaaagtgatgagtctaacagagggattcaaatcactgcacgcttag
DBGET
integrated database retrieval system