Salvia hispanica (chia): 125211376
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Entry
125211376 CDS
T09851
Name
(RefSeq) cysteine desulfurase 1, chloroplastic-like
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00450
Selenocompound metabolism
shis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
125211376
Enzymes [BR:
shis01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
125211376
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
125211376
BRITE hierarchy
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
125211376
NCBI-ProteinID:
XP_047967088
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All DBs
Position
3:complement(25629434..25633170)
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AA seq
464 aa
AA seq
DB search
MIMISMEAVVIKLPSSLRSIHPNPNRTLRTVPFASSSAAPSPLSADPHLAPGSLAHLTRP
DFPILHQEVNGKRLVYLDNAATSQKPAAVVNALRNYYEFYNSNVHRGIHYLSAKATDEYE
LARQKVANFINASDCREIVFTRNATEAINLVAYSWGLSNLKEGDEVILTIAEHHSAIVPW
QFVAQKTGAVLKFVNLGEDEVPDVEKLREMISKRAKLVVVHHVSNVLASILPIDQVVSWA
HDVGAKVLVDACQSVPHMVVDVRSLDADFLVASSHKMCGPTGIGFLYGKSELLSSMPPFL
GGGEMISDVFLDHSTYAEPPSKFEAGTPAIGEAIGLGAAIDYLSAIGMQKIHTYEVELAN
YLYDRLSSVPSVRVYGPKPSRSVTRAALCSFNVEGVHPTDIATFLDQQHAVAIRSGHHCA
QPLHRYLGVSSSARASIHFYNTKEDVDDFINALSDTIDFFASFK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgataatgatatcgatggaggccgtcgtcatcaaactcccctcctccctccgctccatc
caccccaaccctaaccgcactctccgcaccgtccccttcgcttcctcctccgccgctccc
tcacctctctcagccgacccgcacctcgcccccggatccctcgcgcacctcacccgcccc
gacttccccatccttcaccaggaggtgaatgggaagaggctggtgtatttggataacgcc
gccacgtcgcagaagccggcggcggtggtgaacgccctgcggaattattacgaattctat
aattccaacgttcatcgcggaattcattatctgagtgcgaaggcgacggatgaatatgag
ctggcgaggcagaaggtggcgaattttataaacgcgtctgattgtagagagattgtgttt
acgagaaatgcgactgaggcgatcaatttggtggcttatagttgggggctctcgaatctc
aaggagggagatgaggttatacttaccatcgctgaacatcacagtgctattgttccttgg
caatttgttgctcaaaagactggtgcagtattgaagtttgtaaatttaggagaggatgaa
gttccagatgtagaaaagctaagagaaatgatctcaaagcgggccaaacttgtcgttgtt
catcacgtctccaatgtgctggcttctattctcccaattgatcaagtggtaagctgggct
catgatgttggagccaaagtgcttgttgatgcttgtcaaagtgttcctcatatggtggtt
gacgtgaggagccttgatgctgattttctggttgcttcgtcccataagatgtgtgggcct
acaggcattgggttcttatatggcaaaagtgagctcttgtcttccatgcctcctttctta
ggtggtggtgaaatgatatcagatgtatttttggatcactcaacctatgctgaacctcca
tctaaatttgaagctggaactcctgctattggagaagccattggattgggggcagcaatc
gattatttgtcagccattgggatgcaaaagattcatacatatgaggtagagctagcgaat
tatctgtatgatcgactgagctcagtacccagcgtccgtgtctatggccctaaaccttct
agaagcgtgaccagagcagcattatgctctttcaatgtggaaggtgttcatccaaccgac
attgcaacttttctcgaccaacagcatgccgtcgcaattagatcaggtcaccattgtgct
cagcctcttcaccggtatcttggggtgagctcgagtgctcgcgctagcattcatttctac
aacacaaaggaggacgtggatgatttcatcaatgccctctccgacaccatcgactttttt
gcatctttcaagtag
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