Salvia hispanica (chia): 125213576
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Entry
125213576 CDS
T09851
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125213576
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shis02000
]
125213576
04147 Exosome [BR:
shis04147
]
125213576
04090 CD molecules [BR:
shis04090
]
125213576
Enzymes [BR:
shis01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125213576
Transporters [BR:
shis02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125213576
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125213576
CD molecules [BR:
shis04090
]
Proteins
125213576
BRITE hierarchy
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
Zeta_toxin
AAA_22
AAA_16
AAA_15
AAA_21
RsgA_GTPase
AAA_5
AAA_30
AAA_23
SbcC_Walker_B
DUF87
AAA_7
AAA_25
DUF815
AAA_24
Sigma54_activ_2
DLIC
DUF2585
Motif
Other DBs
NCBI-GeneID:
125213576
NCBI-ProteinID:
XP_047970155
LinkDB
All DBs
Position
3:5746977..5753068
Genome browser
AA seq
1263 aa
AA seq
DB search
MGGEEEALADGSGGGGGAEAKNVVAFYKLFVFSDWLDKILMLVGTLGAIGNGMNPPLMAL
LFGELADAFGRTQTGNVLPVVCEVSLKLVYVALGCGAAAFLQVACWMITGERQAARIRTL
YLQTILQQDIAFFDKEVHTGEVIGRMSGDTVLIQDAIGEKVGKFAQLMATFFGGFIIAFA
KGWLLTLVMMSSIPPLMISGGVMSQVVAKMASRGQNAYAAAAVVVEQTIGAIRTVASYTG
EKRAVSEYNKSLDSAYKSSVQQGLATGLGLGTVMFMMFCSYGLAVWYGAKMILEKGHSGG
EVFTVIVAVLTGSLSLGQASPCLTAFAAGRAAAYKMFETIDRKPEIDPFDSRGKVLSDIA
GDIELRDVCFSYPARPTELIFTDFSLSIPRGTTAALVGQSGSGKSTVVSLIERFYDPQSG
QVLIDGTDLREFQLKWIRSKIGLVSQEPVLFMGSIKDNIAYGKDGATDQEIRGAAELANA
AKFIDKLPQGLDTWVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVV
QEALDRIMVNRTTVIVAHRLTTVRNANMIAVIHRGKMVEKGTHTELLEDPEGAYSQLIRL
QEARNEEDEAVEEPEYADEYSRQASQKPTLANLLSRRSSRFRSGSHNSISISFSLSRGVS
VSRNEYEELELVSDKKKHPEVPLSRLAALNRPEAPALLAGTLAAVVNGAIVPFFGILLSL
VIKTFYEPPHKMRQDSKFWAVMFVALGVVSLVAYPLRTYFFGVAGCRLIRRIRMMCFEKV
VNMEVAWFDEAENSSGVIGARLSADAATIRALVGDALAQIVQDLSSAIVGLVIAFFACWQ
LALIVLGLVPLIALNGYVQLKFMMGFSADAKVMYEEASQVANDAVGTIRTVASYCAEDKI
MEMYKKKCEGPVKMGIKQGLISGTGFGLSLALLFFAYATAFYAGARLVESGKTTFEDVFR
VFFAINMAAVAVSQSSTFAPDSSKAKSATASIFAILDRRSNIDPSDESGTILEDFKGEIE
LRHISFKYPTRPNIRIFRDLSLTIHSGKTVALVGESGSGKSTVIALLQRFYNPDSGVITV
DGIDIQKMNLKWLRQHMGLVSQEPVLFSGTIRDNIAYGGKGGNATEAEITAAAKLANAHS
FISGLQQGYDTTVGDRGVQLSGGQKQRIAIARAIVKSPQILLLDEATSALDAESERVVQD
ALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGMIVEKGKHDSLISIKDGFYASLVALHM
AAT
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgggcggagaagaagaggctttggcagacggcagcggcggtggtggcggtgcggaggcg
aagaacgtggttgcattctacaaattatttgttttctcggattggcttgataagatcctc
atgttggtcgggacgttgggtgcgatcggcaacggaatgaacccgcctctcatggccttg
ctctttggtgagctggccgatgcctttggccgcacgcagacgggtaacgtgcttcccgtc
gtgtgcgaggtctcgcttaagctggtctacgtcgcgcttggctgcggcgctgcagcattt
cttcaggtggcatgttggatgatcaccggagagagacaagccgctcggatccgaactctg
tacctacagaccattctgcagcaagacatcgccttcttcgacaaggaggtccacacggga
gaagtcatcgggaggatgtccggcgacacggtcctcatccaagacgccatcggagagaag
gtcggcaagttcgcgcagctgatggcgaccttcttcggaggcttcatcatcgccttcgcc
aaaggctggcttctcacgctcgtcatgatgtcgtccattccgccgctcatgatctccggc
ggggtcatgtcgcaagtcgtcgccaagatggcatcgcgcggccagaacgcctatgctgcc
gcggcggttgtggtggagcaaaccattggcgccattagaactgttgcctcgtatacaggg
gagaagagggcagtgagtgagtacaacaagtctctcgacagcgcttacaaatcatctgtg
cagcaaggcctagccacggggctcggcctcggcactgtcatgttcatgatgttttgcagc
tacggcttggccgtttggtacggcgccaagatgattctcgaaaagggtcactccggtggt
gaagtattcaccgtcatcgtcgctgttctaaccggctcactgtctctgggccaagcctct
ccctgcttgacagcgttcgcagcagggcgagccgcggcctacaagatgttcgagactatt
gacaggaagccggagatcgatccattcgacagcagagggaaggtgttgagcgacattgct
ggagatattgagctgagagatgtatgcttcagttatccagctaggcctactgagctcatc
ttcactgacttctctcttagcattccacgtggcaccactgccgccttggtgggacagagc
gggagtggcaagtccaccgtggttagcctcattgagagattctacgatccacagagtggt
caggttttgatcgatgggaccgacctcagggaattccagctcaagtggatcaggtcgaag
atcgggctcgtgagccaggagccggtgttgttcatgggaagcatcaaggacaacattgcc
tatggcaaggatggcgccactgatcaagagatcagaggcgcggctgagcttgctaatgct
gctaaattcattgataagttgccgcaggggttggatacttgggttggtgagcacgggact
cagctatccggtgggcagaagcagaggattgccatagcccgggctattctgaaggatccg
cggattttgcttctggacgaggctacaagcgcgctggatgcagagtcggagagagtagtt
caggaggcgcttgatcggatcatggtgaacaggacgaccgtgatagtcgcgcatcgtcta
accacagttaggaatgctaacatgattgcagtcattcatagaggaaagatggttgagaaa
ggcacccacacggaattgttggaggatccggaaggcgcatattctcagctcatacggctt
caagaagcgcgtaacgaagaagatgaggctgtggaggagccagaatatgcggatgagtac
agcaggcaagcgagccagaagccaacgctcgcgaatctattgagtcggagatcatccagg
ttcagaagtggaagccacaactcaatatccatctcttttagcctatccagaggggtgagt
gtttcgaggaacgagtacgaggagttggagcttgtttctgacaagaagaagcaccctgag
gtgcctctgtcgcgcctggccgccctcaacaggcctgaggcgccggctctattagctggc
accttggctgcagttgtaaacggggcgatagtcccgttttttggcatcctactgtcactt
gtgatcaagacattctacgagccgcctcacaagatgaggcaggactccaagttctgggct
gtcatgtttgtggctctgggagtggtgtctctggtggcgtacccgctacggacgtacttc
tttggcgtggcgggttgcaggctcatcaggaggatccgaatgatgtgttttgagaaggtg
gtgaacatggaggttgcttggtttgacgaggctgagaattcgagtggggtgattggcgcg
aggctgtcggccgatgcagctactattcgagctctagttggagatgctttggcacagatt
gtgcaggatctttcctctgcaattgtggggttagttatagccttctttgcttgctggcag
ctggctttgattgttcttggattggtgcctctcattgctctcaatggatatgtccaactc
aaattcatgatgggattcagcgccgatgctaaggtgatgtatgaggaagcaagtcaagtg
gctaatgatgctgttggaacaattagaactgtggcttcgtattgtgcagaggataagatt
atggaaatgtacaagaaaaagtgtgaagggccagtgaagatggggataaagcaaggattg
attagtggcaccggttttgggctatctttagccttgttgttcttcgcctacgccacggcc
ttctatgctggagctagacttgttgagtctgggaagactacgttcgaagatgtgtttcgt
gttttctttgcgataaacatggcggccgtcgctgtgtcccaatcgagcacgtttgccccg
gactcgagcaaggccaagagcgcaacggcttccatatttgcgatcctggatagaagatca
aacattgaccccagtgatgaatctggcaccatcttggaggattttaaaggggaaattgag
ctaagacatattagcttcaagtatcctactaggcctaatatcagaatcttcagagacctc
tcactcacaattcacagtggcaagacagtggcgctggtgggggagagcgggagtgggaaa
tcaacggtgatcgccctgctccagagattctacaatcccgactcaggcgtgatcaccgtt
gatggaatcgacatccagaagatgaatctaaaatggctaaggcaacatatgggactagtg
agccaagagccagtcctcttcagtggcacaatcagagacaacatagcctacggcggcaag
ggagggaacgccacagaggccgagatcacggccgcggccaagctggccaacgcccacagc
ttcatcagcgggctgcagcaggggtacgacaccacggttggcgaccgtggggtccagctg
tcgggcgggcagaagcagaggatcgccatagcgagggccattgtgaagtccccgcagata
ttgctgctggacgaggccacgagcgctctggacgcggagtccgagagggtggtgcaggat
gcactcgatcgggtgatggtgaaccggaccacggtggtggtggcgcacaggctgtcgacg
atcaagaatgctgatgtgattgcggtggtgaagaatggaatgattgtggagaaagggaag
catgattctcttattagtattaaagatgggttctatgcatcacttgtggccttgcatatg
gctgctacatga
DBGET
integrated database retrieval system
