Salvia hispanica (chia): 125214501
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Entry
125214501 CDS
T09851
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125214501
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shis02000
]
125214501
04147 Exosome [BR:
shis04147
]
125214501
04090 CD molecules [BR:
shis04090
]
125214501
Enzymes [BR:
shis01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125214501
Transporters [BR:
shis02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125214501
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125214501
CD molecules [BR:
shis04090
]
Proteins
125214501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
AAA_22
AAA_16
Zeta_toxin
AAA_21
RsgA_GTPase
AAA_15
DUF5906
AAA_23
G-alpha
DUF87
YobI-ATPase
nSTAND3
DLIC
DEAD
DUF501
Phage_holin_Dp1
Motif
Other DBs
NCBI-GeneID:
125214501
NCBI-ProteinID:
XP_047971507
LinkDB
All DBs
Position
3:5074467..5080472
Genome browser
AA seq
1250 aa
AA seq
DB search
MAEVSPSDEQQSPENAREISEKQSKAIEKVAYYKLFSFADATDWVLMVIGVITSVASGLA
LPAMTFLYGELANAFGHNVGNQAVVHEVSKVALRFFYLALGSGVAAFSQVSCWMITGERQ
AARIRNLYLKAILRQDIGYFDKETNTAQIVERMSSDTVIIQDAMGEKIGKLIQLLSSFVG
GFIIAFARGWLLTLVLISVIPVLVVAAAFMTIVLTRLASRGQTAYTEAALLVEQTIASIR
TVASFTGERRAVDRYEKSLHTAYKAGVQEGLFAGLGSGVSMLALYCSYALAVWFGSKMII
EKGYTGGHVLNIMMAILLGSFFLGQISPCLSAFSAGQVAAFKIFETIIRKPDIDPYSRDG
RVMEDLKGDVELRDVDFSYPSRPNDMIFSGFSLRVASGIKLALVGESGSGKSTIISLVER
FYDPQRGEILIDGINIKEFQVRWIRGKIGLVSQEPVLFASTIRDNIAYGKDGASLEEIRR
AAELANAAKFINNLPQGLDTMVGVNGTQLSGGQKQRIALARAIIKDPRILLLDEATSALD
AESEKIVQESLDKVMIDRTTIIVAHRLTTVKNADSIAVIRNGKIVEKGTHTELIQNPYGP
YTQLTQLQELEKQNPEADTNEASGRHRISSSSEMSNSARHPFNTETETEMTEAAPQTTPG
SSKPNLSLYRLALLNKPELPALILGSTAAVANGIILPLFGLLFSGAIKSFYDPPHQLRRE
SKFWAGMFVALGAASLVATPAKTYLFAVAGCRLIKRLRLMCFDKVAHMEISWFDKAENSS
GAVGLRLSSDVKCVRSLVGESLGLVVQNVATAVAGLLIGFEASWELSLIVMAMLPLIGLH
GYVHMKFVLGFSGDSQKLYEEATQLASDGVGNIRTVASFCAEEKVMELHRQKCKQPVKLG
TKHGLLSGAGFGMSVFFLYSVYAVSYYAGARLVHAGHITFGEVFRVFIGLTMTAVAISQS
GALAPDSGKARAGAASIFKLLDQKSAIDSSENSGMVLENMKGDIQFHHVSFNYPSRPDVQ
IFRDICLSIQSGKTIAIVGESGSGKSTIISLLQRFYDPNSGEITLDGLEIKKLNLKWLRQ
QMGLVSQEPVLLNDTIRANIAYGKEGDATEAEVFAAAELANSNKFISSLQKGYDTIVGER
GIQLSGGQKQRVAIARAIVKDPKIMLLDEATSALDAESERVVQDALDRAMVDRTTIVVAH
RLSTIKNADLIAVIKNGIVAEKGKHETLIDMKHGIYASLVALHNDNSASS
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagttagcccttccgacgagcaacaatcgccggaaaatgccagagaaatctcc
gagaaacagagcaaagccatcgaaaaagttgcatactacaaactcttttcctttgcagac
gccacggattgggtgctgatggtgatcggagtgataacatccgtggcgagcggtttggcg
ttgccggccatgactttcctctacggagaattagccaacgcgttcggccacaacgtaggt
aaccaagccgttgtccatgaagtctccaaggtggccttaaggttcttttatcttgccttg
gggtcaggagtagctgctttttctcaggtgtcttgctggatgatcactggagaaaggcag
gctgctcggattcgaaacttatacctcaaagctatactgagacaagatattggatacttt
gataaagagacaaacacagcacaaattgtggagaggatgtctagtgacactgttatcatt
caagatgctatgggagagaagattgggaagctgatacagcttctatcatcatttgttgga
ggcttcatcatagcttttgcaagaggatggcttctcactcttgttctgatctcggtgatc
cctgtcctcgtcgttgcagccgctttcatgaccattgtgttgacaagattggcatcccgt
ggccagacggcctacacagaggccgctcttttggttgagcagacaattgcctcaataaga
actgtagcatctttcactggggagaggcgagcggttgacagatacgaaaaatctctgcat
acagcttataaagccggtgtgcaggagggcttgttcgccggattaggctctggagtttct
atgttggccctctactgcagttacgcgttggcggtctggtttgggtccaaaatgatcatt
gaaaaaggctatactggaggccatgttttgaacatcatgatggctattctgttgggatca
tttttcttggggcaaatatccccatgcttgagtgcattctcggccggccaagttgccgct
ttcaaaatctttgagacgataatcaggaagccagatatcgatccctacagtagagacggg
cgcgttatggaagacttaaagggggatgtagagctaagggatgtggatttcagctatcca
tctaggcctaatgatatgatcttcagtggcttctctcttagagtagcaagtgggatcaaa
ctggccttagttggggaaagtgggagtgggaaatcaaccattatcagtcttgttgagagg
ttctatgatccacagagaggtgagatcttgattgatgggatcaatatcaaagagtttcag
gtgaggtggattagagggaagattggtctagtaagccaggagcccgtgctgttcgcctcg
acaataagagacaacattgcctatggcaaggacggggcgtccctcgaagaaatcaggcgt
gctgcagagcttgctaatgctgctaagttcatcaacaaccttcctcaagggcttgacacg
atggtcggagtgaatggaactcagctctcgggagggcagaagcagaggatagcattagcc
cgggcgattataaaagacccgaggattttgctattggatgaagctacaagcgcccttgat
gcagagtcggagaagattgtgcaggagtcgctagacaaggtcatgatagatcggaccacc
atcatcgttgcccatcgtctaactacggtgaagaatgcagattccattgccgtgatccgc
aatggaaaaatcgtagaaaaaggtacacataccgagctaatccaaaatccatacggaccc
tacactcaactaactcaacttcaagaacttgaaaaacaaaaccctgaggccgacaccaac
gaagcctccggccgccaccgcatctcatcctcgtcggaaatgagcaatagcgcacgccat
ccgttcaacacggagacggagacggagatgacagaggcagcgccacaaaccacgcccggc
tcatcaaagcctaacttgtccctctaccgcctcgcccttctcaacaaacctgagctcccg
gcgctaatcctcgggtccaccgccgcagtagcaaacggcataatcctccccctcttcggc
ctcctcttctccggcgccatcaagagcttctacgacccgccccaccagctccggcgagag
tccaaattctgggcgggcatgttcgtcgccctcggcgcggcgtctctggtggcgacgccg
gcgaagacgtacttgttcgccgtggccgggtgcaggctgatcaagcgcctgaggctcatg
tgcttcgataaggttgcgcatatggagatcagctggttcgacaaggccgagaattcgagc
ggcgcggtgggcctgcggctctcgtccgacgtcaagtgcgtgaggagcctggtcggagaa
tcgctgggtttggtggtgcagaatgttgcaacggcggttgcgggtttgctgatcgggttc
gaggcgagctgggagctgtcgcttatagtgatggcgatgctgccgcttattgggctacat
ggatatgttcatatgaagttcgttctcggttttagtggcgactcgcagaagttgtacgag
gaagcgactcaacttgcgagtgatggtgtaggaaatattagaaccgtagcttcattttgc
gcggaggagaaggtgatggagcttcaccggcaaaaatgcaagcagccagtgaaactaggg
actaagcacgggctgctgagcggagcaggttttgggatgtccgtcttctttctatactcg
gtatatgctgttagttactatgctggggctcgactcgttcatgccggacatattacattt
ggagaagtttttcgtgtgttcatcggactgacgatgaccgcggttgctatatcccagtcc
ggcgcccttgcacccgacagtgggaaagcgagagccggggccgcatctattttcaagctt
cttgatcagaaatccgcaatcgattcttcggagaactcaggaatggtcctagaaaacatg
aagggggatattcagtttcaccatgttagctttaactaccctagtagacctgatgtccaa
attttcagagatatatgcttatcaattcaatcgggcaagaccattgctatcgttggagaa
agcggaagtgggaaatcaacgatcatttctctattgcaacgattttatgatccaaattca
ggtgagatcacacttgatggtctagaaatcaagaaattaaacttgaaatggctaaggcaa
cagatggggcttgtgagccaagagccggttttattaaacgacacgatacgagccaatatc
gcctatggaaaggaaggcgacgccacagaagcagaggtttttgctgctgctgaattggct
aattctaacaaattcatcagttccttgcaaaaggggtacgatacaatagtcggcgaacgg
ggaatacaattatccggtgggcaaaaacagcgagttgcgattgcacgagctatagtgaaa
gatccgaagattatgctacttgatgaagccacaagcgctcttgatgccgaatccgaaagg
gtcgttcaagatgctttagaccgagccatggtggacaggaccacaatagtggttgctcat
agattatccactattaagaatgctgatttgattgcagttataaaaaatggaatcgtagct
gaaaaaggaaagcacgagacattgattgatatgaaacatggtatctatgcttctttggtg
gcacttcacaatgacaatagtgcttcttcttaa
DBGET
integrated database retrieval system
