Salvia hispanica (chia): 125216271
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Entry
125216271 CDS
T09851
Name
(RefSeq) elongator complex protein 3-like
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shis03016
]
125216271
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
125216271
Transfer RNA biogenesis [BR:
shis03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
125216271
BRITE hierarchy
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
FR47
Motif
Other DBs
NCBI-GeneID:
125216271
NCBI-ProteinID:
XP_047973901
LinkDB
All DBs
Position
3:14623798..14628112
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AA seq
564 aa
AA seq
DB search
MAAVEVMPEARKLPRPGRGGVIGHGLSEEEARVKAIAEIVSTMVDLSRKGQDVDLNAVKS
AACRKYGLSKAPKLVEMIAALPESEKEALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA
TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD
KVEFILMGGTFMSLPAEYRDYFTRNLHDALSGHTSANVEEAVSYSEHSAIKCIGMTIETR
PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFSLAKDAGFKVVA
HMMPDLPHVGVERDMESFKEFFESPRFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPE
QLVDIIARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRT
REAGIQDIHHKIKPEEVQLVRRDYTANEGWETFLSYEDTRQDILVGLLRLRKCGKNVTCP
ELTGKCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIATSEHRSKKLAVISG
VGTRHYYRKLGYELEGPYMVKYLK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggaagtcatgcctgaggctcggaagctcccgcggcctggtcgcggcgga
gtaatcggccacggactctccgaagaagaagcccgcgtcaaagcaatcgctgaaatagtg
tccacaatggttgatctctcgcgcaagggccaggacgttgacctaaatgccgtcaaatcg
gcggcgtgccggaaatacgggctctccaaggcgccgaagctcgtcgagatgatagcagcg
ctgccggaatccgagaaggaggctttgctgcccaaactccgggctaagccagtgcgaacg
gcgtctggtattgcggtggttgccgtgatgtcgaagcctcaccgctgcccacatattgca
acgacagggaatatatgcgtgtattgccccggtggccccgattccgatttcgagtacagc
acgcagagttatacgggatatgagcctactagcatgagagctattagggctagatacaac
ccttatgtccaggcaagaagcagaatcgatcagcttaagagattgggtcacagtgttgac
aaggtcgagttcatcttgatgggtggtacttttatgtcattgcccgcagagtaccgtgat
tattttactaggaatctacatgatgctttatcgggccacacttccgccaatgttgaagaa
gcagtatcttactctgagcacagtgcaataaagtgtattgggatgacaatcgagacgcgg
ccagactactgcttgggaccacatttgaggcagatgctttcatatggttgtacaagactg
gaaattggagttcagagcacatatgaggatgttgctcgtgacaccaataggggtcacact
gtagcagctgtggctgattgcttttccttagcaaaggatgctggattcaaggtagtagct
catatgatgcctgatcttccacatgttggtgtcgagagagacatggaaagttttaaagag
ttctttgagagccctcgctttagagctgatgggctaaaaatctatcccaccctagtcatt
cgtggaacaggactttatgagctttggaagactggcaggtatagaaattatcctcctgaa
cagcttgttgacatcatagctcggattctagctatggttcctccttggactcgggtttat
cgagttcaacgagatatccctatgcctctagttacttctggtgttgagaagggtaatctt
cgggaactagctttagcaaggatggatgatttgggcttgaaatgcagagatgttagaaca
cgtgaagcgggtatccaggacattcaccacaagataaaaccagaggaagtccagcttgtt
cgccgtgattatacagcaaatgagggatgggagacctttctttcatatgaagacactcgc
caggatattcttgttgggctactgcgtttgcggaaatgtggaaagaatgtgacttgccca
gagcttacggggaagtgttcaattgttcgtgaattgcatgtttatgggacagcagttcct
gttcatgggcgggacgctgataaactgcaacatcaaggttatggtacactattgatggag
gaggccgaacggattgctacaagcgaacacagatcgaaaaagttagccgtgatttcaggt
gtaggaacgaggcattactatagaaagttggggtacgagcttgaaggtccgtacatggtg
aaatacctcaaatga
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