Salvia hispanica (chia): 125220541
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Entry
125220541 CDS
T09851
Name
(RefSeq) ABC transporter B family member 1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125220541
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shis02000
]
125220541
04147 Exosome [BR:
shis04147
]
125220541
04090 CD molecules [BR:
shis04090
]
125220541
Enzymes [BR:
shis01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125220541
Transporters [BR:
shis02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125220541
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125220541
CD molecules [BR:
shis04090
]
Proteins
125220541
BRITE hierarchy
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_22
RsgA_GTPase
Zeta_toxin
AAA_29
AAA_30
AAA_15
AAA_5
nSTAND1
APS_kinase
DUF87
SbcC_Walker_B
Rad17
G-alpha
COG5_C
DUF1360
Motif
Other DBs
NCBI-GeneID:
125220541
NCBI-ProteinID:
XP_047978659
LinkDB
All DBs
Position
4:complement(36855840..36861208)
Genome browser
AA seq
1271 aa
AA seq
DB search
MEVEATAADPEKPASPPPVVLKDLFRFADGLDYALMGIGSVGAIVHGSSLPLFLRFFADL
VNSFGSNANDVDKMTHQVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLE
AALNQDIQFFDTQVRTSDVVFAINTDAVMVQDAISEKLGNFLHYMATFVSGFVVGFTAAW
QLALVTLAVVPLIAVIGGIHATTLSKLSAKSQDALSEAGNIAEQTIAQIRTVLAYVGESR
ALQSYSAALRVAQRLGYKIGLAKGLGLGATYFTVFCCYALLLWYGGYLVRHHYTNGGLAI
ATMFAVMIGGLALGQSAPSMAAFAKARIAAAKIFRVIDHKPGVVSDSESGLELEAVTGKL
ELKNVDFCYPSRPETQILNNFSLTVSAGKTIALVGSSGSGKSTVVSLIERFYDPSSGQVL
LDGHDITTLKLRWLRQQIGLVSQEPALFATTIKENILLGRGDASLVQIEEAARVANAHSF
IAKLPDGYDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEA
LDRFMIGRTTLVIAHRLSTIRKSDLVAVLQQGSVTEIGNHDELLARGESGIYAKLIRMQE
AAANEAALNNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSLDAG
YPNYRHEKLAFKEQASSFLRLAKMNSPEWSYALFGSIGSVVCGTLSAFFAYVLSAVLSVY
YSPNHAYMIREIAKYCYLLIGVSSAALIFNTMQHYFWDRVGENLTKRVREKMLAAVVKNE
MAWFDQEENESSRVAARLALDANNVRSAIGDRISVIMQNSALMLVACTAGFVLQWRLALV
LVAVFPIVVAATVLQKMFMNGFSGDLEASHAKATQLAGEAVANVRTVAAFNSEEKIVGLF
SLSLNTPLRRCFWKGQIAGSGYGIAQFLLYASYALGLWYASWLVKHGISDFSKTIRVFMV
LMVSANGAAETLTLAPDFIKGGRAMRSVFELLDRKTEIEPDDQDAITVPDKLRGEVEFKH
VDFAYPTRPDVSVFRDLNLRARAGKTLALVGPSGCGKSSVIALIQRFYEPSSGRVMIDGK
DIRKYNLKSLRRHIAVVPQEPCLFGATIYENIAYGHEAATEAEIIEAATLANAHKFISSL
PEGYKTYAGERGVQLSGGQKQRVALARAFLRKAEVMLLDEATSALDAESERCIQEALERA
CGGKTTIVVAHRLTTIRSAHVIAVLDDGKVAEQGSHSHLLKNCPEGVYARMIQLQRLGNA
STSSTQSAICM
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgaggccaccgccgccgacccggagaagcccgcctcgcctccgccggttgtg
ctcaaggacctcttccgcttcgccgatggattggattacgctctcatgggaatcggctca
gttggcgcgattgtccatggcagctccctccctctgtttctcagattcttcgctgatctc
gttaattctttcggctccaatgccaacgatgttgataagatgacgcaccaagttttgaag
tatgcgttttactttcttgtggttggagctgcgatatgggcgtcttcttgggcagaaata
tcgtgctggatgtggactggtgagaggcagtccactaagatgaggatcaagtatttggag
gcggctttgaaccaagacattcaattcttcgacacacaggtgaggacatccgatgttgtt
ttcgccatcaacaccgacgccgtcatggtccaagatgccattagtgaaaagttggggaat
ttcttgcactacatggctacgtttgtttctggatttgtggtggggttcaccgcggcgtgg
cagctagctcttgtcacgctcgccgtggttcccctcatcgccgtgatcggaggcatccac
gccaccacgctctccaagctctccgccaagagccaggatgctctgtcggaagcaggaaac
atcgctgaacagactatagctcaaattcggacagtattggcgtacgtgggagagtcgagg
gcattgcagtcgtattcagcagcgttgagagttgctcagaggctcggatacaagattgga
ttggccaaagggttgggacttggagctacttatttcactgttttctgctgctatgccctt
ctgctctggtatggaggctacttggttaggcaccattatactaatggaggtcttgctatt
gcaaccatgtttgctgtcatgattggtggccttgctttggggcaatctgctcccagcatg
gctgcatttgcaaaggcaagaattgcagctgctaaaatcttccgagtgatagaccataag
ccgggcgttgtctcagacagtgaatccggcctggagttggaagccgtaaccggaaaattg
gagctcaaaaatgttgatttctgctacccttcaaggccagaaactcaaatacttaacaat
ttcagtctcactgtttccgctgggaaaacaatagcccttgtcggaagcagtggctcgggt
aaaagcacggtggtgtccctcatcgagagattctatgatccctcctcagggcaagtgctg
ctagacggtcatgacataacaacgttgaagttgagatggctgaggcagcagattgggctg
gtgagccaagagcctgctctgtttgccacaaccatcaaagaaaacatactgttgggcaga
ggggatgcaagtttagtccagattgaagaggctgcgcgagttgccaatgcacattcattc
attgcaaagctcccggatggctatgacactcaggtcggggagagaggggtccagctgtcg
ggcgggcagaagcagagaatagctatagcaagggcaatgctcaagaatccagccatcttg
ctcttggatgaagcaaccagtgcattagattccgagtcggagaagctagtgcaagaggcc
cttgaccgtttcatgattggaaggactactctagttatcgcccatcgcctctccaccatc
cgaaaatctgaccttgttgctgtgttgcagcaaggcagtgtcactgaaatcgggaatcac
gatgagctcttagccaggggagaaagcggcatctacgccaagctaatcagaatgcaagaa
gcagcagctaatgaagcggctctcaataatgccaggaagagcagtgcaaggccttctagt
gcgaggaactcggtgagctcgccaataatcactagaaattcgtcctatggaagatcgcct
tactcgagaagactgtccgacttctccacctcggactttagcctctccttagatgctgga
taccctaactatcgccatgaaaagcttgcgtttaaggagcaagcaagctcattcttgcgt
cttgcaaagatgaattcacccgagtggagttatgccttgtttggctcgataggctcagtc
gtctgtggcactctcagtgcattctttgcgtatgtgctgagtgctgttcttagtgtctac
tacagcccgaatcatgcctacatgataagggagatcgcaaaatactgctacctcttgatt
ggtgtgtcgtcagccgccctcattttcaacacaatgcagcattacttctgggatagagtc
ggggagaacttgacaaaacgtgtcagggagaagatgctggctgcagtcgtgaagaacgaa
atggcgtggttcgatcaggaagagaatgagagctcgagagttgcagctaggctagctctg
gatgcgaacaatgttaggtctgcaattggagacaggatttctgttataatgcagaattct
gctctcatgcttgttgcctgcactgctggcttcgtgttgcagtggcgcctcgccctcgtc
ctcgttgctgtcttccccatcgtcgttgcagcaactgttttacagaaaatgttcatgaat
ggattctccggtgacttggaagcttcgcacgctaaagcgacgcagctggccggggaggct
gtagccaatgtgagaaccgttgcagcattcaattcggaagagaagatcgtcggcctattc
agcttgagcctcaacactcccctaaggcgttgcttttggaaggggcagatagctgggagt
ggctatggcattgctcagttcttgctctacgcctcctacgcgttaggcctgtggtacgct
tcttggctggtgaagcatggcatctctgacttctcgaagacgatacgtgtctttatggtg
ctgatggtctccgccaatggcgctgctgagacgctcaccctcgcccccgatttcatcaag
ggaggccgcgcaatgcggtccgtgtttgagctcctagaccgcaagaccgagatagaacca
gacgaccaagacgccatcactgtccctgataagctccgtggcgaggttgaattcaagcac
gtggacttcgcataccctacgagacccgatgtgtcagtcttccgcgacctgaacctccgt
gctcgggcagggaagaccttggcccttgtcggcccgagtggctgtgggaagagctcagtg
atcgccctgatacagagattctatgagccttcgtccggtcgcgtgatgatcgatgggaag
gatataaggaagtataatctaaagtcattgaggagacacatagctgtggtgccgcaagag
ccgtgcctctttggggcaacgatctacgagaacatcgcctacgggcacgaagcagcaacg
gaggcagaaataatagaggcagcaacgctggcaaatgcgcacaagttcatatcgtcgttg
ccagaggggtacaagacgtatgctggggagagaggggtgcagctgtcgggggggcagaag
cagcgggtggccctggctcgggcattcctgaggaaggcggaggtgatgctgctggacgag
gcgacgagtgcgctggatgcggagtcggagagatgcatacaggaggcactggagcgggcg
tgtggagggaagacgacgattgtggtggcgcataggctgaccacgatcagaagcgcgcac
gtgatagcggtgctggatgatggcaaggtggcggagcaggggtcgcattcgcatctgttg
aagaactgcccggagggggtgtatgcgcggatgatacagctgcagagattggggaatgct
tccacttcttcaacgcagtcagcgatttgtatgtag
DBGET
integrated database retrieval system
