Salvia hispanica (chia): 125223519
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Entry
125223519 CDS
T09851
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 33A-like
KO
K27472
mediator of RNA polymerase II transcription subunit 33
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125223519
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
125223519
BRITE hierarchy
Other DBs
NCBI-GeneID:
125223519
NCBI-ProteinID:
XP_047982654
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Position
4:complement(54447840..54453660)
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AA seq
1316 aa
AA seq
DB search
MAMEVSCSTIWDTILVQTKVAQDKGSDPLLWSIQISSNLSSAGITLPCVELANHLVSHIC
WENNVPIAWKFLEKALALKIVPPFLVLGLLSQRVIPYRGSCPAAFRLYLELIKRHAFSLK
EYTDLPNYEKTMFSLDEILQLSHLFGLQANEASVLLVLFIFSIVWQLVDAALDDEGLLQL
AEMEPRWPVKPQDMEVDNVPGIFEGKRKEYNERLRAVNTVFAIELLGEFLQNKITSRILH
LAGQNMCTHWKNFTQRMELLVENSSFLRNSKTIRPEALLQFLSDTQRSNHHHFKPSLVQE
FHPTLQSRPLINYAGLCLGTSRSALWLPLDMLLEDAMDGSQVNATSAVEIITGLVKSLQA
TNAASWDEIFLGLWMAALRLVQRERDPIEGPVPRLDTRLSMLLSITTLIVADLVGEEESA
AMDEIGYGFGAEHHVPGKRRKDLIFSLQNLQDYQSLLTPPQSVILSANQAAAKAMLFVSG
INASAYFECISTMDMPVNCSGSLYHLIVESCIARNLLDTSAYLWPGYVNGRINQLPRNVP
TQVGWSSFMKGAPLTPMMISALVSTPASSFAEIEKIFEIATKGSSDERTAAASVLCGASL
IRGWSIQEHILYFITRLLSPPVPVDYSGSESHLIACAPMLNILLVGISPVDCVQIFSIHG
LVPELAGSLMTICEVFGSCVPNISWTLTTGEEISAHVVFSNAFALLLKLWRFNHPPIEYG
VGDVPPVGSQLTPEYLLLVRNSYLVSSGNLLKDPNRRRLAQVASSTSSKPIFVDSFPKLK
VWYRQHLSCIASPLTGLVNGTPVLHTVDTLLNMMFRNINRGNQTVTIVSSGSSSSSGPGS
EDGYLRPKLPAWDILEAVPFVADAALTACAHGRLSPRELCTGLKDLADYLPATLATIVSY
FSAEVTRGVWKTVFMNGTDWPSPAANLSNVEEQIKKILAATGVDIPSLAAGGSSPAALPL
PLAAFVSLTITYKLDKASQRFLDLAGPALESLAAGCPWPCMPIVASLWTQKAKRWSDFLV
FSASRTVFLHSNDAVVQLLRSCFSAILGFNSSCSISSNGGIGALLGHGFGSHFNGGISAV
APGILYLRVHRSIRDIMFLREEIVSLLMQTVQDIVHGGLPGRPNSGKNHGGGSSLAAVLT
KVKLAASLGASVVFLTGGLGLVQSLIKETLPSWFMSMNQGGERGGMLPMLRGYALAYLAA
LSGAFIWGVDSSASSAASKRRPKILGCHMEFVASALDGKISLGCDRATWRAYVSGFLSLV
VRCMPTWIQDLDVELLRRLSKGLRRWHEAELALALLGAGGVGVMGSAAELVVESEL
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggaggtgagctgcagcaccatttgggacactattttggtgcaaactaaggtg
gcccaagacaagggcagtgacccattgctgtggtcaatccaaatctcctccaatttgagc
tctgctggaatcactctgccttgtgttgaattggccaaccatttggtttctcacatttgt
tgggaaaacaatgtgcccattgcttggaaattcttggagaaggcattagctctcaagatt
gtgcctccctttcttgttcttggattgctttcgcaaagagtgatcccgtatcgaggttct
tgtccagcagcgtttaggttatacctggaactcatcaaacggcatgctttttccctgaaa
gagtacacagatttgccaaactatgagaagaccatgttttcactggacgaaatcctccag
ttatctcacctatttggcttgcaagcgaatgaagctagtgtgctgctggttctcttcatc
ttctctatcgtttggcagttggttgacgcagcattggatgatgaagggctgcttcagctt
gcggagatggagcctcggtggcctgtcaaacctcaagatatggaagttgataatgtcccc
ggcatttttgaagggaagaggaaagaatataatgagagactgagagctgttaatactgtc
tttgccatcgagttattgggggagttcttacaaaataaaataacttcaaggattcttcac
ttggctggccaaaacatgtgtacacattggaaaaacttcactcagcgaatggaacttctt
gttgaaaactcctcatttctgagaaactcgaaaaccattagacccgaagctctacttcag
tttctatcagacactcaaagaagcaaccatcatcacttcaagccaagcttagtgcaggag
ttccatcctacgttacaatccagacctctcattaactatgctggcctctgtcttggaact
agccggtctgctctctggcttcctctcgacatgcttctagaagatgcaatggatggttca
caagtgaacgctacaagtgccgtagaaatcatcacaggtttggttaaatctcttcaagca
actaatgcggcctcttgggatgagatctttctcggactttggatggctgctcttcgcctt
gttcagagagagagggatcccattgaggggccggtgcctcgactggatactcgtctgagc
atgttgctgtcaatcacaactctcatagttgctgatcttgtcggggaagaggaaagtgca
gccatggatgagatcggatatggttttggagccgagcatcacgtccctgggaaacgaaga
aaggatttgatatttagtctccagaatctacaggattatcagagcttgctcacaccacca
cagtcagtcatactttctgctaatcaggctgctgctaaagccatgctgttcgtttctggc
attaatgccagtgcatacttcgagtgcatcagcacaatggacatgccggttaactgctct
ggaagcctttaccatttaattgttgagtcatgtatagctagaaatctcttggacacatct
gcctatttgtggcccggttatgtaaatggtcgcatcaaccagttaccgcgcaatgtacca
actcaagttgggtggtcatcatttatgaaaggggcgcctctcactcccatgatgatcagt
gctttagtctctacgcctgcttcaagctttgcagagattgaaaaaatcttcgagatagca
accaaaggatcaagtgatgaaaggacagctgctgcttctgttctttgtggggcctcgttg
attcgtggatggagcattcaggagcacattctttattttataactagattactatctcct
ccggttcctgtcgactattctgggagcgaaagccacttgatagcctgtgctcccatgctc
aatattctccttgttggaatctcaccagttgactgtgttcagattttctccattcatggc
ttggttccggagcttgctggttcattgatgacaatatgtgaggtcttcggttcatgcgtg
ccgaacatctcatggaccctgaccactggagaagaaatatcagcacatgtcgttttttca
aatgcatttgcccttcttctaaagctgtggagatttaatcatcctcccattgagtatgga
gtaggagacgtgcctccggtaggatcccagctcactcccgaatacctgttactggtacgg
aattcgtacctagtatcatccggtaacttactcaaggatccaaaccggaggaggcttgct
caggtagcaagttctacatcatccaaacccatatttgtggactcgttccccaaactaaaa
gtgtggtatagacagcatttgtcttgcatagcttctcctctcaccggcctcgtcaatggg
actcctgttcttcacactgttgatacactactgaacatgatgttccgaaatataaacaga
ggaaaccaaaccgtgacaattgtctcatccggaagtagcagctcgtccggaccgggaagc
gaggatggttatctgaggcctaagttacctgcatgggatatactcgaagctgtccccttc
gtggctgatgctgctctaactgcgtgtgctcatggaagattgtcgcctcgcgaactctgc
acagggctgaaagatttggctgattatcttccggcaactttggctaccatcgtgagttac
ttctcggctgaagtgactcgaggagtatggaagacggttttcatgaacggaacagattgg
ccgagtccggctgctaatctctccaatgtcgaggaacagatcaagaaaatattagcagcc
accggagtcgatatcccaagtcttgctgcaggaggaagttctccggctgcacttccattg
cctctggcggcattcgtgagcctcaccataacctacaagctcgataaagcctcccagcgt
tttctggatctggccggaccagctctagagtcccttgctgcaggctgcccatggccatgc
atgccgatagttgcatctttgtggactcaaaaggcaaagcgttggagtgacttcctcgtc
ttctctgcttctcgaactgtcttcctgcacagcaatgacgctgttgttcagctccttcgg
agctgcttcagtgccatccttggattcaacagcagctgcagcatctcaagcaatggtggg
atcggagctcttctaggccatggattcgggtctcatttcaatggcgggatctctgctgtc
gccccggggatcttgtatctgagagttcaccgctcgatcagagatatcatgttcttgagg
gaggagatagtttcgttgctcatgcaaactgtgcaagacatagtccacgggggcctcccg
ggaaggcctaacagcgggaagaaccatggcgggggttcttctctcgctgcagtgttaacg
aaggtgaagctagcagcatcgctcggggcttctgtcgtgttcttaaccggggggctgggg
ctcgtgcagtcgttaatcaaggaaactcttccatcttggttcatgtcaatgaaccaagga
ggagagaggggtggaatgctcccgatgctccgaggctacgcgctggcatatcttgctgcg
ctgtcgggagctttcatctggggcgtcgactcatcagcatcatcagcagcttcaaaacgg
cggcccaagatcctcgggtgtcacatggagttcgtggcaagtgcgctagacgggaagatt
tcactggggtgtgatcgagctacttggcgcgcttatgtgtcgggattcctgagcttggtg
gtgcggtgcatgcctacgtggatacaggacttggacgtcgagctgctgaggaggctgtcg
aagggtctgaggcggtggcacgaggccgagctggccctcgctctgctcggagctggtgga
gttggggtcatgggctcagcagctgagctagttgtggagagtgagttgtaa
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