Spiroplasma helicoides: SHELI_v1c07960
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Entry
SHELI_v1c07960 CDS
T04620
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
shj
Spiroplasma helicoides
Pathway
shj03030
DNA replication
shj03430
Mismatch repair
shj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHELI_v1c07960 (dnaE)
03430 Mismatch repair
SHELI_v1c07960 (dnaE)
03440 Homologous recombination
SHELI_v1c07960 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shj03032
]
SHELI_v1c07960 (dnaE)
03400 DNA repair and recombination proteins [BR:
shj03400
]
SHELI_v1c07960 (dnaE)
Enzymes [BR:
shj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHELI_v1c07960 (dnaE)
DNA replication proteins [BR:
shj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SHELI_v1c07960 (dnaE)
DNA repair and recombination proteins [BR:
shj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SHELI_v1c07960 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
SPRY
DUF447_C
Motif
Other DBs
NCBI-ProteinID:
AOG60745
UniProt:
A0A1B3SLD3
LinkDB
All DBs
Position
complement(912219..915200)
Genome browser
AA seq
993 aa
AA seq
DB search
MIYTSLVNVKSCYNFLNSTIKPQDYIDFLKLNNLKVGFYSDKNTMYGAAEFEKLANLNNI
KPVIGVSLDFQFGSIIFYAKNNEGYKMVSYVSSFVSNKDSFNEEEVKSEIFRQNLENVIV
IYVPNLIAEETIFNQIANLTKNNFYIGITKQNFDKYNKLDNAIFADSIHYLLEEEYLEYK
VLISIKDARLINEIDDLEKAFYLNVEQIKMYIDIDKHIKNMEMLVSQVEDEVINNNQIHF
LKYPNSKEVPSDNYIESVCYEKLEFEKLNNEEYKTRLNYELEVIKKMGFSDYFLIVGDMV
QFAKSKGILVGPGRGSAAGSLVSYLLGITALDPIQWGLLFERFLNIDRVTLPDIDIDFQD
NRRDEILEYLFDKYGKNHFATITTFQTIGIKNALRDCGRVFDIAIEEVNQMTKFVSDKNV
LDLDKAIKDSKTLQKYKEKYPQIFEVASKIIGLPRQTGTHAAGVVFCDVDLWDVVPTKIG
ISGILQTQYSMNYLENIGLIKTDILGLRNLSIIDEVIKYIKISRKSSISLDDISLKDPKT
FELLRSGETSGIFQLESTGMTDVLIKMNTNSVEDIAVTSSLFRPGPQENIPEYIKRKNSK
AKKYAIDENLKDILDSTYGIIVYQEQVMEVLKKIANFSLGKADIVRRAMGKKDAKLMDQF
KIEFIENAQKNNYTQSKAEELWHYIERFAEYGFNKSHAIAYSLISYWMAYLKTHYMPEFY
CSLLNGVLRNEARTSKYLSELKKYGFKINGPSIKNPNSIYYFSNNMVNIPLNVVKGIGPE
FLKTIKQIYKEDKQAFESILGTISKLMGKSLSESRYTALVSVGAFDCFGYSRKVLLEYKE
EVLNLANIYDKVHYDKIELDLPTEKDKPEDLARYEKEYLGFYVSAHPLSILRQKIVGNEN
LYHISNLTQPDQVVDIFVSIENITTKTDKNGGKMCFLTVGDETGEIDVTIFSSVYEKLKI
DLSIAQNIIIKIKTQLFNNKLNALLVEFKKVIS
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgatttatacaagtttagtaaatgtgaagtcttgctataattttttaaattcaacaatc
aaacctcaagattacatagattttttaaaactaaataatttaaaggttggtttttactca
gataaaaatacaatgtatggggctgctgaatttgaaaaattagcaaacttaaataatata
aagccagtcattggagtgtctttagatttccaatttggtagcataatattttatgcaaaa
aataatgaaggttacaaaatggttagttatgtgtcttcttttgtgtctaacaaggattct
tttaatgaagaagaagttaaaagtgaaatttttaggcaaaacttagaaaatgttattgtt
atttatgtgcctaatttaatagcagaagaaacaatttttaatcaaatagctaacctaact
aaaaataatttttatataggcattacaaaacaaaattttgataaatataataaattagat
aatgccatatttgctgactctattcactatttattggaagaagaatatttggagtataaa
gttttgatatctattaaggacgcaagattaattaatgagattgacgatttagaaaaggct
ttttatttaaatgtagaacagataaaaatgtatattgatattgataaacacattaaaaac
atggaaatgttagtttctcaagtagaagatgaagttattaataataatcagatacatttt
ttaaaatatccaaactcaaaagaagtaccatcagacaattacatagaatcagtttgttat
gaaaaacttgaatttgaaaaactaaataatgaagaatacaaaacaagacttaactatgag
ttagaagtaattaaaaagatgggtttttctgattattttttaatagttggtgatatggtt
caatttgctaaaagcaaaggtattttagttggtccaggaagaggttctgctgcaggtagt
ttagtatcatatcttttgggtattactgcgcttgatccaattcagtgaggtttattattt
gaacgttttttaaatattgatagggtaacattaccagatattgatattgattttcaagat
aacagaagagatgaaatattagaatatttatttgataaatacggtaaaaatcattttgct
acaataaccacttttcaaactataggtattaaaaatgcattaagggattgtggaagagtt
tttgatatagctattgaagaagttaatcaaatgactaagtttgtatcagataaaaatgtt
ttggatttagataaagcaatcaaggactcaaaaacattgcaaaaatacaaagaaaaatat
ccacaaatttttgaagtagctagcaaaataataggattaccaagacaaacaggaactcat
gcagcaggagttgttttttgcgacgttgatttatgagatgtagtaccaactaaaatcgga
attagcggtatattacaaacacaatattcaatgaattatttagaaaatataggacttatc
aaaacagacatactagggctaaggaatttatcaataattgatgaggttataaaatatatc
aaaatttcaagaaaatcaagtatttctttagatgatataagtttaaaagaccctaaaact
tttgaattacttagaagcggagaaactagtggtatatttcaacttgaatcaacaggtatg
acagatgtattgattaaaatgaatacaaactctgttgaagatattgctgttacaagttca
ttgtttagaccaggaccacaagaaaatatccctgaatatattaaaagaaaaaactcaaaa
gcaaaaaaatatgcaatagatgaaaatctaaaagatattttagactcaacttatggcata
atagtttatcaagagcaagttatggaagtattgaaaaaaattgcaaattttagtcttggt
aaagctgatattgtaagaagagccatgggtaaaaaagatgctaaattgatggatcagttc
aaaattgagtttatagaaaatgcacaaaaaaataattatacacaatcaaaagcagaagaa
ttatgacactatattgaaagatttgctgaatatgggtttaataaatcgcatgcaatagca
tattcattaataagttattgaatggcctaccttaaaactcattatatgcctgaattttat
tgttctttattaaatggagttttaagaaatgaagcaagaacatcaaaatatttatctgaa
ctaaaaaaatatggatttaaaataaatggtccaagcattaaaaatccaaatagcatttac
tatttttcaaataacatggtaaacattccattaaatgtagtaaaagggattggacctgaa
tttttaaagaccattaagcagatttataaagaagataaacaagcttttgagtcaatatta
ggaactatctcaaaacttatgggaaaaagtctaagtgaatctagatatacagcattagta
tctgttggtgcttttgattgctttggttattcaagaaaagttcttttagaatacaaagaa
gaagttttaaatttagcaaacatttatgataaagttcattatgataaaatagaattggat
ttacccacagaaaaagataaaccagaagatttagctaggtatgaaaaagaatatttaggg
ttttatgttagtgcacatcctttgtcaattttaagacaaaaaatagttggaaatgaaaat
ctatatcatatatctaatttgacacagccagaccaagtggtagatatctttgtatccatt
gaaaatataaccacaaaaacagataaaaacggaggaaaaatgtgttttttaaccgttggg
gatgaaactggtgaaatagatgttacgatcttttcttcggtttatgaaaaactgaagatt
gacttaagtattgcgcaaaatataattattaaaatcaaaactcagttgttcaataataaa
ttgaatgctttacttgtagagtttaaaaaagttattagttag
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