Shewanella halifaxensis: Shal_1079
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Entry
Shal_1079 CDS
T00654
Name
(GenBank) sigma E regulatory protein, MucB/RseB
KO
K03598
sigma-E factor negative regulatory protein RseB
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shl03021
]
Shal_1079
Transcription machinery [BR:
shl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Shal_1079
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MucB_RseB
MucB_RseB_C
LolA_like
PepSY_2
TrbC
Motif
Other DBs
NCBI-ProteinID:
ABZ75648
UniProt:
B0TIV3
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All DBs
Position
1317534..1318466
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AA seq
310 aa
AA seq
DB search
MRLILLAIIAMSFPAMAREDMPAKAWLENMSQALREQEFKISLIQLQADHIRPLVYIHGK
VNDEEVAFLEHLNGPPKNAVRVGNTVTFIEHDQPAYSVYSNRIQGVIPGAFADDVSKLED
GYQFVLGGRSRIAGRPGQLVRIIPNDNNRYGYQIWLDMDTYLPLRFDMISGDKQLLEQLL
VVELLVLDEVPAILKEAYKQEWPAVMSQSDREGGEDWQFSWLPAGFKVLVKDQHRLIGSK
EAVEYIAISDGLANISVYVAKAGEAPLPEELVTRNGLSLATERVGNAEVVAVGKVPAETL
SRIAKSIMLQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctaatcctattggctattatagccatgagttttcccgcgatggcgcgggaagat
atgcccgccaaagcttggctagaaaatatgagccaagccctgcgagaacaagaatttaaa
atttcccttatccaacttcaagccgatcatatccgcccgctggtttatatacacggtaaa
gttaatgatgaagaagtggcctttttagagcacctaaatggaccgcctaaaaatgctgtg
cgagtgggaaatactgtgacttttatcgagcacgatcaacctgcttacagtgtatattcc
aatcgtattcaaggggttattcctggtgcatttgccgatgacgtctctaagcttgaggat
ggttatcagtttgtcttagggggacgtagccgaattgcgggtcgtccagggcaacttgta
cgtattattcctaacgataacaaccgttatggctaccagatttggttagatatggatact
tacttgccgctgcgtttcgatatgattagtggtgataagcaactactagagcagttattg
gttgttgaattactcgtgcttgacgaggttcctgcgattttaaaagaagcctacaagcaa
gagtggccagctgtgatgtctcagtctgacagagaaggtggtgaggattggcaatttagc
tggttgccagcgggatttaaagtactcgtcaaagatcaacataggttgattggtagcaaa
gaagcggttgaatatattgccatcagtgatggtttagccaatatatctgtttatgtcgct
aaagcgggggaagcaccactacctgaagagttagttacccgtaatggtttatctctagcg
acggagcgagtcggtaatgccgaggtcgttgctgttggtaaagtacctgctgaaacctta
agccgtattgctaaaagcatcatgttgcagtga
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