Shewanella halifaxensis: Shal_1948
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Entry
Shal_1948 CDS
T00654
Name
(GenBank) transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shl03000
]
Shal_1948
Transcription factors [BR:
shl03000
]
Prokaryotic type
Helix-turn-helix
Other families
Shal_1948
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
HTH_24
HTH_29
MarR
Penicillinase_R
HTH_Crp_2
DUF3640
Motif
Other DBs
NCBI-ProteinID:
ABZ76513
UniProt:
B0TSD3
LinkDB
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Position
complement(2341609..2342463)
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AA seq
284 aa
AA seq
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MNTLEKVQKSLTHFSKSERKVAEVILSSPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVSRHVEEDDSPDSYTTKIFESSMASLDTARQSIDTAAINK
AVDVLTQAKKISFFGLGASASVAHDAQNKFFRFNVPVISFDDVLMQRMSCINSNEGDVVV
LISHTGRTKSLIDIAKLARENGAAVIGITARNSPLSTVCTLPVTMEVPEDTDMYLPMASR
LAQLVIIDVLATGFTLRRGPRFRENLKRVKEVLKESRIDKDPVL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaataccctcgaaaaggtgcaaaaaagccttacccattttagtaaatctgaacgtaaa
gtcgcagaagttattttgtcttcgccacaaacggcaattcactcaagtatcgccactttg
gctaaaatggccgatgtgagtgagcctacggttaaccgcttctgtcgtcgccttgatacc
aaaggctttccggactttaaacttcatttagcccaaagccttgctaacggtaccccttat
gttagtcgccatgtagaagaagacgacagtccagactcttatactactaagatatttgaa
tcttctatggcctctttagataccgcccgccaaagtatcgacaccgcagcaatcaataag
gctgtcgatgtgttaactcaggctaagaagatctctttctttggtcttggcgcttcagca
tctgttgctcatgatgcacagaacaaattcttccgctttaatgttccagtcatcagtttc
gatgatgttcttatgcagcgtatgagctgtataaacagtaatgaaggcgatgtagtagta
cttatctctcacacaggccgtacaaagtcgcttatcgatattgctaaactggctcgtgaa
aatggtgcggcggttatcggtattacggctcgtaactcaccgctatcaacggtctgtaca
cttccagtgacaatggaagtaccagaagacacagatatgtacttacctatggcttcacgt
ttggcacagttagttataattgatgtgctagcgacaggctttaccctcagaagaggtcct
cgtttccgtgagaatttgaagcgagtaaaggaagtgttaaaagagtcaagaatagacaaa
gatccagttctgtaa
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