Shewanella halifaxensis: Shal_2372
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Entry
Shal_2372 CDS
T00654
Name
(GenBank) putative RNA methylase, NOL1/NOP2/sun family
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shl03009
]
Shal_2372
Enzymes [BR:
shl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
Shal_2372
Ribosome biogenesis [BR:
shl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Shal_2372
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
YebU_pre-PUA_dom
Methyltranf_PUA
Methyltransf_31
TruB-C_2
NSUN5_fdxn-like
TRM
Methyltransf_25
PCMT
Motif
Other DBs
NCBI-ProteinID:
ABZ76931
UniProt:
B0TIZ6
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Position
2872763..2874202
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AA seq
479 aa
AA seq
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MAHFNQNFLDSIERDLPSHLSMEDFIAYSNKPLRLSIRVNTLKISTENFIDLMSAKGWSF
DPIPWCNQGFWVTISSDLQLGNTIEHLQGLFYIQEASSMLPPTALFDSHADNENDLSQFA
QTRVLDMASAPGSKTTQIAALMNNQGLLVANEYSASRVKVLHANVARMGVSNCALTHFDA
RVFGEYLFETFDSVLLDAPCSGEGTIRKDPDALKNWDNNDNKGIVDTQKALIESAFLALK
VGGCLVYSTCALSRQENQDVCHHLKTAFGEAVEFAALTELFPDADKACTEEGFLHVWPQI
YDSEGFFVAKIRKVSAVERTLPEPKMQKNFPFTAAKTKQIEELTAYFEDSFAITLPTDAE
IMVRDLEFWLFPKAVMPLIGKMRFQRIGIKLADALKKGYKVRHEAILALSSPTRFELSDE
QAKEFLMGRDISLVEKVKPQGEVIVSYASNPLGVAKHLGNKLKNNLPRDLVKDKIALYQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggctcattttaatcagaattttctcgacagtattgaacgtgatctcccttctcacctt
tcaatggaagactttattgcttacagcaataaaccattacgtctttctattcgggtcaat
acactcaaaattagtaccgaaaactttattgacttgatgtcagcaaaaggctggagcttt
gaccctattccctggtgtaaccaaggtttctgggtaacgataagcagtgatctacagtta
ggtaatactatcgagcacttacaaggcttattttatattcaagaagccagctcaatgcta
cctcctaccgcactgtttgactcacatgctgacaatgaaaatgatcttagccagtttgcc
caaacccgagtactggacatggcttcagcgccaggctcaaaaacaacgcaaatagcggca
ctgatgaacaatcaaggcctattagtcgctaacgagtattctgccagccgagtaaaagtg
ttgcatgctaacgttgcaagaatgggcgtatcaaactgtgccctcacccactttgacgct
agagtatttggtgagtacctatttgaaacattcgactcagtattactcgatgccccctgt
agtggcgaaggcaccattcgtaaagatcctgatgcgttaaaaaactgggataacaatgac
aataagggcattgttgatactcaaaaagccttaattgaatcagcctttctcgcattaaag
gtgggcggttgcttagtttattcgacctgtgcattgagtcgtcaagaaaaccaagacgtc
tgccatcatttaaaaacggcctttggcgaggctgttgagtttgccgcactaactgagcta
ttcccggatgcagataaagcatgtaccgaagaaggatttttacacgtatggccgcaaatt
tatgatagtgaaggcttctttgtcgccaagatccgcaaagtctccgctgtcgagcgcacc
ttacctgaacctaaaatgcaaaagaactttccattcactgctgcaaagacaaagcaaatc
gaagagttaaccgcttattttgaagattcgtttgccattacattgcctacggatgccgag
atcatggtacgcgatttagagttttggttatttccaaaagcggttatgccacttataggc
aaaatgcgctttcagcgaataggaattaagctcgcggatgcattaaagaaaggctataag
gtacgccacgaagctatcttggcactatcgtcacccacacgatttgaactcagcgacgaa
caagcgaaagagttcttaatggggcgtgatatcagtttagtggaaaaagttaaacctcaa
ggtgaggtcattgtcagttatgccagcaatccactgggtgtagcaaagcacctaggtaat
aaactaaaaaataatcttcccagagacttagtaaaagataagatcgcgttatatcagtaa
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