Shewanella halifaxensis: Shal_3013
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Entry
Shal_3013 CDS
T00654
Name
(GenBank) diguanylate cyclase
Organism
shl
Shewanella halifaxensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE4
Motif
Other DBs
NCBI-ProteinID:
ABZ77562
UniProt:
B0TPB5
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Position
3673383..3675116
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AA seq
577 aa
AA seq
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MSFTRLILCFKRFLAIIQLKSQTFNQLQLKISVAIFILFASAAFAYRIWVQVPAIERSLL
KVSEQELVALNFAFEQMSKPLHTINYDYAVWDQTYNYMKSNSPVAKEYYEQHEYPDDTFK
SLKVDGIFIFDNDQNAVFSKGVRHSSNAQKLQFELMDLLKHPESRLLSPLKKTAYPPQAQ
PFNNPSSVPTKTGVIATKYGPALYSSSSILQSDRTGPIMGYIVFIRLIDDEFMAELSRFT
SAGVELSEVKISDDVANIPYLGSGFDLTKLAPTSQRLVRNIDGRPLIKFTLYHTNSAPPS
ILGSDIYILLAEMSILLLLAYFLYSYFLVQPVRKLAIDIEEMGRSREIKKLRCRYPITEL
VNVATHFNALMGTIQEQTKQLNEQVYIDKLTNIPNRRGFEQRLETYCQLLARQQIGFTLI
IADVDHFKEYNDTLGHLAGDEALIKVAQTLSQQFFRADDICARFGGEEFIMLYRDIPDEP
LQRKLDAMIQAFEDLALPHPSATTAKYVTISFGVCKVLAVEDFEFKNNADIIGRQAVLLA
DKALYQAKANGRNQYQKVTISIDEIETLESNHPSDLA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
ttgagctttactagattaatactctgttttaaaaggtttctagctatcattcaattaaaa
tctcaaacctttaatcagctgcagcttaagatttcagtcgccatttttatcctattcgct
agcgccgcgtttgcctaccggatctgggtgcaagttcccgctattgaacgctcattatta
aaagtctctgagcaggagctagtcgcgttaaactttgcctttgagcagatgagtaagcct
ctacataccatcaattacgattatgcggtttgggatcaaacctacaactacatgaaatca
aatagcccagtggctaaagaatactatgagcaacacgaataccccgatgacacctttaaa
agtctaaaagtcgatggcatctttatcttcgataacgatcaaaatgccgtatttagtaaa
ggggtacgccacagtagcaatgcccaaaaactacagtttgaattgatggaccttttgaag
caccctgaaagtagactgctatcaccgctgaaaaaaacagcctatcctcctcaagctcag
ccttttaataaccccagtagcgtgccaacaaagacaggagttatcgccactaaatatggc
ccagccctttacagctccagtagtattttgcagtctgatcgcacaggaccgataatgggt
tacattgtctttattcgactgattgacgatgagtttatggctgagctttcaaggtttact
tccgcgggagttgaacttagtgaagtcaaaatctctgacgatgtcgctaacatcccctat
ctgggttctggctttgatctaactaaactagcgccaacctctcagcgtctggttcgcaat
attgacggtcggccactgataaagtttactctctaccacactaattcagcaccaccttcc
atactcggtagcgatatctacatactactggctgaaatgtcgattctactattattagcc
tactttctatactcgtacttcttagtacaacctgtaagaaagctcgctatcgatatcgaa
gagatggggaggagtcgagagatcaagaagctaagatgccgctaccccattacagagttg
gtgaatgttgccacccacttcaacgcgcttatgggcacaattcaagagcagacaaaacag
ctcaacgagcaggtttatatcgataaactgaccaatatccccaatcgtcgtggctttgag
caaaggcttgagacctactgccaactcctagcgaggcagcagataggttttaccctgatt
attgccgatgtggatcacttcaaagagtataacgacaccctaggccacttagccggtgat
gaggcgctgattaaagtcgcacaaactctgagtcaacagtttttccgtgcagacgacata
tgcgctcgtttcggtggcgaggagttcattatgctctaccgtgatattccggacgagcca
ctgcagcgcaaactcgatgccatgatccaagcctttgaagacttggcgctacctcaccct
agtgcaacgacggctaaatatgtgactatcagctttggggtgtgcaaggtgctagcagta
gaagactttgagtttaaaaataacgcagatattatcggccgtcaggccgtgttacttgcc
gataaagccttataccaagcaaaagccaacggccgcaatcaataccaaaaagtcacaata
tcaatcgatgaaattgaaacattagaaagcaatcatccgagcgatttagcgtaa
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