Shewanella halifaxensis: Shal_3101
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Entry
Shal_3101 CDS
T00654
Name
(GenBank) Carbohydrate-selective porin OprB
KO
K07267
porin
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_3101
Transporters [BR:
shl02000
]
Other transporters
Pores ion channels [TC:
1
]
Shal_3101
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
ABZ77648
UniProt:
B0TQ56
LinkDB
All DBs
Position
complement(3783660..3784916)
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AA seq
418 aa
AA seq
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MNTMRLAVLIGGCLACGSLFSVASFASTSYASTSFGSPNTVDNTIKDNTRKKESWRENLA
SEHNLTLGLDYQVLGLSASSPTEGGDDNSAAGVARFYGSWNLTGLESGNVGGLVWKVEHR
QAYTDTAPKSYSFIEPGLGYIGMIGPTYSDQGGRLTNLYWKQQFNQGKTALMAGYLDTSD
YVDTYALASPWTGFTNLAFSTGAGAIGLPDDGILGLAVGHMLDENFYIIAGAADAKGRSD
KPLDGFETLFNDHKLFTTFEFGWTASQEHIYTDNVHLTLWHIDGGTQHNLTQPSESGQGV
NFSASFFVTPQIMPFIRGGFSEGDVALYDKSLTLGVGYFGLGAEKNNLGFAINFSEVNEN
LGKAYGVTDDKQFTSELYYNMSLGEFVQLTPNIQYIDNPAISTEKDTWVFGLRARVTF
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaatgcgtttagcggttttaatcggagggtgtcttgcttgtggcagcctgttt
agcgttgctagctttgccagtaccagttatgccagtaccagctttggtagccccaatacc
gtagataacaccatcaaagacaatacccgtaagaaagagtcttggcgtgaaaacttagcc
agtgagcataacctgactttgggactggattatcaagtgcttgggttgtcggcaagttct
cctaccgaaggcggggacgataactctgcggcgggtgtggctcgattttacggttcttgg
aacctgacagggttagagagcggcaatgtaggtggattagtgtggaaagtagagcatcga
caggcttataccgatacagctccaaaatcctattcatttattgagcctgggcttggctac
attggcatgataggtcctacctatagcgaccaaggtggccgactgaccaacctctattgg
aagcagcaatttaatcagggtaaaaccgcgctaatggcgggctacttagatacatctgat
tatgttgatacctatgcattagcaagtccatggactgggtttaccaatctagcatttagc
accggtgcgggggctataggcctgcctgacgatggaattttggggcttgctgttggtcat
atgcttgatgagaacttttatattattgccggggctgctgatgcgaaaggacgctcagat
aagcctttggatggttttgaaaccctgtttaatgatcataagctgtttaccacatttgag
tttggctggacggcatcacaggagcatatttataccgataatgtgcacctgactctgtgg
catatcgatgggggaacacagcataatctcacccaaccaagtgaaagtggtcaaggggtt
aacttctccgccagtttctttgttacgccgcagattatgccttttattcgcggtggattt
tctgaaggtgatgtggcgctatacgataaatcgttaacattgggtgtgggttactttggt
ttaggcgctgagaaaaataacttaggttttgcgattaacttcagcgaagtgaatgagaac
ttaggcaaggcctatggcgttactgacgacaagcaatttacttcagagctctattacaac
atgagtctgggtgagtttgtgcagttaacccctaatattcaatatattgataaccccgct
atctcaacagaaaaagatacatgggtgtttggtttgagggcgagagtgactttctaa
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